Commit Graph

8871 Commits

Author SHA1 Message Date
7069b52a44 Merge pull request #1172 from akohlmey/next-patch-release
Patch release 24 October 2018
2018-10-23 18:08:38 -04:00
b6b6270716 fix bug reported in issue #1173 2018-10-23 11:58:00 -04:00
0293dee9b2 patch 24Oct2018 2018-10-23 11:03:51 -04:00
6107f00e9d Merge pull request #1164 from akohlmey/fix-halt-for-minimize
Enable use of fix halt for minimizations
2018-10-23 10:35:26 -04:00
1d38f2d725 Merge pull request #1165 from akohlmey/refactor-kspace-base-class
Refactor kspace base class to have a settings() method
2018-10-23 10:35:12 -04:00
4a5c14f60d Merge pull request #1148 from akohlmey/deprecated-styles
Implement dummy classes for deprecated and removed styles
2018-10-23 10:34:58 -04:00
527ec61586 Merge pull request #1169 from akohlmey/kokkos-parallel-for-workaround
Workaround for parallel_for() compilation issue with newer GNU compilers
2018-10-22 11:17:47 -04:00
76a2a9ab0a Fixed normalization error for ordinate degree 2018-10-20 17:16:47 -06:00
8223f5e0a3 Eliminated another initialization error and tweaked rdf-adf example 2018-10-20 16:46:45 -06:00
8aecefe233 fix uninitialized data bug in compute adf 2018-10-20 08:12:19 -04:00
348febdf4b work around for parallel_for() compilation issue with newer compilers
apparently, data items used inside parallel_for() constructs have
rather strict requirements on const-ness, which is enforced by
newer GNU compilers. As a workaround we construct explicit const
copies of those class instances. This closes #1045
2018-10-20 02:54:48 -04:00
3a735d15d4 Added compute_rdf.cpp 2018-10-19 18:43:04 -06:00
04a4a29fcf Creatd new compute ADF for angular distribution function 2018-10-19 18:36:11 -06:00
8cd70f7d78 fix triclinic rounding bug for lib interface as well 2018-10-19 15:27:38 -06:00
01c3ab5979 update embedded command line help summary string for new feature 2018-10-19 16:49:06 -04:00
709013be5a harden code against buffer overflows 2018-10-19 16:48:37 -04:00
db32373b32 fix some typos caused by trusting emacs' smart case-preserving replace too much 2018-10-19 16:11:13 -04:00
9d7c4ac5f2 add depreacted kspace style 2018-10-19 16:01:26 -04:00
0ec94b2ad6 replace non-ASCII character 2018-10-19 16:01:13 -04:00
83c830fd8a port kspace refactor to GPU and KOKKOS package 2018-10-19 15:47:00 -04:00
3a4bef351c refactor kspace style in USER-SCAFACOS and fix uninitialized handle bug 2018-10-19 15:32:29 -04:00
2f52eee6bf kspace refactor compiles for KSPACE and USER-OMP 2018-10-19 15:11:37 -04:00
80e0dddae0 use min_post_force() method to hook fix halt into minimization 2018-10-19 14:08:25 -04:00
cc6f1be82d first attempt to port fix halt to minimizations 2018-10-19 07:26:49 -04:00
9090fd0255 propagate the kspace change to a the first few kspace styles 2018-10-18 16:31:17 -04:00
7deb1df2b6 split kspace style constructor into plain constructor and settings() method 2018-10-18 16:30:45 -04:00
d9dd80b368 added -restart2dump command-line option 2018-10-18 14:24:48 -06:00
dcde84eb53 bug fix for create_atoms single remap and triclinic 2018-10-18 11:22:51 -06:00
7bb5821baf add deprecated dump and region styles 2018-10-17 18:13:12 -04:00
2b0e474729 implement deprecated styles for bond, angle, dihedral, and improper 2018-10-17 16:26:20 -04:00
65ebbdada3 add DEPRECATED compute style 2018-10-17 16:05:10 -04:00
b71f530bd0 make default style name for deprecated styles uppercase, so it is considered internal
also consolidate the writeout message across styles into a single convenience function
2018-10-17 16:04:52 -04:00
2273604533 resolve portability issues to windows w.r.t. fixed width integer types 2018-10-16 13:49:06 -04:00
bea0a3091d Fix to allow suffix and pair hybrid to work together with USER-INTEL. 2018-10-15 10:25:39 -07:00
7968d2ed22 Merge pull request #1155 from athomps/sna-atom-leakfix2
Fixed a segfault introduced by memory-leak fix (#1125)
2018-10-12 13:01:15 -04:00
382e91cf5b Merge pull request #1156 from wmbrownIntel/user-intel-hybrid
Adding hybrid support to USER-INTEL package + EAM/intel bug fix
2018-10-12 12:35:36 -04:00
ce63a22783 Merge pull request #1157 from wmbrownIntel/user-intel-makefiles
Changes to intel Makefiles to make use of MKL consistent.
2018-10-12 12:32:28 -04:00
8224c89f93 Revert size_velocity change in atom_vec_dpd_kokkos 2018-10-11 16:38:44 -06:00
a223338b47 Fix hang with Kokkos and USER-DPD examples 2018-10-11 16:32:44 -06:00
8eb74d8fb3 Add missing Kokkos pack/unpack comm vel functions 2018-10-11 13:21:44 -06:00
e5c6b6987a Merge branch 'master' of github.com:lammps/lammps into granular-kokkos 2018-10-11 13:14:25 -06:00
8cbee78725 Changes to intel Makefiles to make use of MKL consistent. 2018-10-11 05:46:40 -07:00
c37deebffa Adding full hybrid support to USER-INTEL package and fixing bug with EAM parameter initialization. 2018-10-11 05:12:00 -07:00
c142288eb3 Fixed a segfault introduced by memory-leak fix 2018-10-10 17:24:14 -06:00
a1266a1a1e Fix compile error with copysign function 2018-10-10 14:19:23 -06:00
7cce002cf9 Makefile fix from the mailing list 2018-10-10 14:18:24 -06:00
2def00d4c9 Add missing files to .gitignore 2018-10-10 14:18:00 -06:00
3d0722b974 Merge branch 'master' of github.com:lammps/lammps into granular-kokkos 2018-10-10 10:43:54 -06:00
747f72aca2 Merge branch 'granular-kokkos' of https://github.com/valleymouth/lammps into granular-kokkos 2018-10-10 09:53:15 +01:00
1b76e14224 Merge pull request #1151 from akohlmey/next-patch-release
update version number for next patch release
2018-10-10 02:20:50 +02:00