Commit Graph

3805 Commits

Author SHA1 Message Date
79b005dc3d patch 7Mar17 2017-03-07 11:40:07 -07:00
920641bbff Merge pull request #399 from rbberger/docs_spelling_fixes
Correct spelling errors in documentation
2017-03-07 09:47:22 -07:00
4af6557568 Merge pull request #394 from jaapkroe/kolmogorov-crespi
Added Kolmogorov-Crespi potential
2017-03-07 09:46:08 -07:00
020e75e7ef Merge pull request #386 from akohlmey/doc-consistentcy
improve consistency of manual
2017-03-07 09:33:14 -07:00
efaa4c6710 new neigh_modify exclude option, other SNAP changes 2017-03-07 09:31:12 -07:00
21be86c423 Fix typos in txt2html 2017-03-07 00:58:03 -05:00
007f3c66a0 Third batch of spelling fixes in manual 2017-03-07 00:51:31 -05:00
32708860a9 Add remaining false positives 2017-03-07 00:27:35 -05:00
fc9eebb936 Added spellcheck utility to documentation build
Uses the sphinxcontrib-spelling extension and requires PyEnchant and
aspell-en to be installed.

Adds the optional make target 'spelling' which produces the file
spelling/output.txt. It contains all words it detects.

Due to the large number of false positives, words in
utils/sphinx-config/false_positives.txt are ignored.
2017-03-05 21:23:41 -05:00
084d831bce Second batch of spelling fixes in manual 2017-03-05 21:02:51 -05:00
fd78486086 First batch of spelling fixes in manual 2017-03-05 18:27:38 -05:00
8a0e44db83 updated documentation and ev_tally 2017-03-01 16:13:44 +01:00
3ac74a1d69 update lammps.book file for latest doc changes 2017-02-28 11:21:18 -05:00
3605208a45 add a few more missing details for integrating pair style kolmogorov/crespi/z 2017-02-28 11:16:27 -05:00
9b01949cac make the introduction of the command-by-category list less confusing 2017-02-28 11:05:40 -05:00
323570c920 added jpg for kolmogorov-crespi-z equations and fixed hybrid/overlay check in source 2017-02-28 15:39:01 +01:00
a1b40b902d Added Kolmogorov-Crespi potential 2017-02-28 14:59:13 +01:00
2708c86836 fix typos: moleclue -> molecule
this closes #386
2017-02-27 18:03:18 -05:00
20a9ffe69d improve consistency and resolve dead links for USER-CGDNA related doc files 2017-02-21 21:27:34 -05:00
49e83b4348 patch 21Feb17 sync with GHub 2017-02-21 16:07:26 -07:00
b70c670aac Merge pull request #383 from stanmoore1/rshan_class2_kk
Kokkos version of class2 bond, angle, dihedral, and improper from Ray Shan
2017-02-21 15:52:10 -07:00
429264a12b Merge pull request #380 from hheenen/core_shell_documentation
updated documentation and examples for coreshell
2017-02-21 15:50:53 -07:00
1cd4c48ccc new SNAP potential for W 2017-02-21 15:49:21 -07:00
ccaec315db Updating docs for Kokkos class2 2017-02-15 13:00:33 -07:00
0fb8dacc00 one more Finchham to Fincham change 2017-02-14 07:41:05 -05:00
6b923476b9 updated documentation and examples for coreshell 2017-02-14 13:14:22 +01:00
cb982f2f28 sync 13Feb17 patch back to GH 2017-02-13 09:05:03 -07:00
4843296d4e Merge pull request #372 from akohlmey/fft-cleanup
simplify FFT3d code by removing support for outdated FFT libraries
2017-02-13 08:53:13 -07:00
2bdda8f6c0 patch 12Feb17 - change int to tagint for compute group/group 2017-02-13 08:40:54 -07:00
0068ef5616 added molecule option to compute group/group command 2017-02-10 09:25:32 -07:00
8c074a363a Merge branch 'master' into small-updates-and-fixes 2017-02-08 14:32:44 -05:00
191453e1c7 Merge branch 'master' into fft-cleanup 2017-02-03 16:53:10 -05:00
6595fde0a1 explain in more detail the handling of error checking for numerical inputs 2017-02-02 11:58:12 -05:00
9d1991bf84 remove support for obsolete legacy FFT libraries and point -DFFT_FFTW to FFTW3 2017-02-02 08:10:23 -05:00
0a87b7443a Updated contributing authors and docs 2017-02-02 13:42:47 +01:00
f8506fee23 sync GHub with SVN 2017-01-26 14:06:43 -07:00
caea8973a3 add neighbor list kind output to screen 2017-01-20 13:24:09 -07:00
9a299875da simplified neighbor list copying to avoid possible same-timestep re-build issues 2017-01-19 17:01:15 -07:00
3af4b3c28c Merge pull request #337 from ohenrich/user-cgdna
Added source code and documentation for USER-CGDNA
2017-01-18 11:31:35 -07:00
d2fc88a626 patch 17Jan17 2017-01-17 10:14:53 -07:00
c19d2011bb Merge pull request #334 from sstrong99/flow_gauss_changeRef
Updated the reference for the flow/gauss method
2017-01-17 09:12:22 -07:00
973bef4d45 Merge pull request #332 from akohlmey/coord-atom-orientorder-atom-enhancements
Coord atom orientorder atom enhancements
2017-01-17 09:11:45 -07:00
252e07e083 Merge pull request #330 from akohlmey/collected-small-bugfixes
Collected small bugfixes
2017-01-17 09:08:00 -07:00
d8bc590aaf Merge pull request #327 from stanmoore1/kokkos_lib_update
Updating Kokkos lib
2017-01-17 09:04:12 -07:00
c9bea60710 Merge pull request #326 from Pakketeretet2/github-tutorial-update
Updated images of succesful merge.
2017-01-17 09:03:46 -07:00
5cd856c97f fix spring doc page update 2017-01-17 09:02:56 -07:00
98ceb6feb1 add missing html files to lammps.book 2017-01-13 18:11:23 -05:00
374abea0f0 some minor documentation integration tweaks for USER-CGDNA package 2017-01-13 18:09:45 -05:00
96259ea2d2 Added source code and documentation for USER-CGDNA 2017-01-13 13:36:54 +00:00
1229f6f60b Updated the reference for the flow/gauss method, the new reference is much more comprehensive 2017-01-12 10:15:18 -07:00