LAMMPS (10 Jan 2012) # GI-System units metal newton off package gpu force/neigh 0 1 1 atom_style charge read_data data.phosphate orthogonal box = (33.0201 33.0201 33.0201) to (86.9799 86.9799 86.9799) 1 by 1 by 1 MPI processor grid 10950 atoms 10950 velocities replicate 3 3 3 orthogonal box = (33.0201 33.0201 33.0201) to (194.899 194.899 194.899) 1 by 1 by 1 MPI processor grid 295650 atoms pair_style lj/cut/coul/long/gpu 15.0 pair_coeff 1 1 0.0 0.29 pair_coeff 1 2 0.0 0.29 pair_coeff 1 3 0.000668 2.5738064 pair_coeff 2 2 0.0 0.29 pair_coeff 2 3 0.004251 1.91988674 pair_coeff 3 3 0.012185 2.91706967 kspace_style pppm/gpu 1e-5 neighbor 2.0 bin thermo 100 timestep 0.001 fix 1 all npt temp 400 400 0.01 iso 1000.0 1000.0 1.0 run 200 PPPM initialization ... G vector = 0.210111 grid = 108 108 108 stencil order = 5 RMS precision = 8.76251e-06 using double precision FFTs brick FFT buffer size/proc = 1520875 1259712 158700 Memory usage per processor = 266.913 Mbytes Step Temp E_pair E_mol TotEng Press Volume 0 400.30257 -2381941.5 0 -2366643.7 -449.93537 4242016.4 100 411.69679 -2392428.5 0 -2376695.2 7046.7022 4308883.6 200 401.28406 -2394152.4 0 -2378817.1 3243.2514 4334284.6 Loop time of 174.691 on 1 procs for 200 steps with 295650 atoms Pair time (%) = 12.053 (6.89962) Kspce time (%) = 80.9936 (46.3638) Neigh time (%) = 0.013356 (0.00764546) Comm time (%) = 0.347907 (0.199155) Outpt time (%) = 0.00172615 (0.000988114) Other time (%) = 81.2818 (46.5288) FFT time (% of Kspce) = 56.1923 (69.3786) FFT Gflps 3d (1d only) = 1.25956 2.99555 Nlocal: 295650 ave 295650 max 295650 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 226982 ave 226982 max 226982 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 0 Ave neighs/atom = 0 Neighbor list builds = 6 Dangerous builds = 0 unfix 1