LAMMPS (7 Jul 2009) # FENE beadspring benchmark units lj atom_style bond special_bonds fene read_data data.chain 1 = max bonds/atom orthogonal box = (-16.796 -16.796 -16.796) to (16.796 16.796 16.796) 1 by 2 by 2 processor grid 32000 atoms 32000 velocities 31680 bonds 2 = max # of 1-2 neighbors 2 = max # of special neighbors neighbor 0.4 bin neigh_modify every 1 delay 1 bond_style fene bond_coeff 1 30.0 1.5 1.0 1.0 pair_style lj/cut 1.12 pair_modify shift yes pair_coeff 1 1 1.0 1.0 1.12 fix 1 all nve fix 2 all langevin 1.0 1.0 10.0 904297 thermo 100 timestep 0.012 run 100 Memory usage per processor = 3.56846 Mbytes Step Temp E_pair E_mol TotEng Press 0 0.97029772 0.44484087 20.494523 22.394765 4.6721833 100 0.96717514 0.4422441 20.503712 22.396674 4.6686541 Loop time of 0.512345 on 4 procs for 100 steps with 32000 atoms Pair time (%) = 0.086697 (16.9216) Bond time (%) = 0.0585724 (11.4322) Neigh time (%) = 0.164889 (32.1832) Comm time (%) = 0.0972116 (18.9739) Outpt time (%) = 0.000659764 (0.128773) Other time (%) = 0.104315 (20.3603) Nlocal: 8000 ave 8024 max 7973 min Histogram: 1 0 0 1 0 0 0 1 0 1 Nghost: 4169 ave 4212 max 4141 min Histogram: 1 0 1 1 0 0 0 0 0 1 Neighs: 38936.2 ave 39212 max 38690 min Histogram: 1 0 0 1 0 1 0 0 0 1 Total # of neighbors = 155745 Ave neighs/atom = 4.86703 Ave special neighs/atom = 1.98 Neighbor list builds = 25 Dangerous builds = 0