units real molecule water tip3p.mol atom_style full variable radius equal 100.0 region box block $(-v_radius) $(v_radius) $(-v_radius) $(v_radius) $(-v_radius) $(v_radius) create_box 2 box bond/types 1 angle/types 1 & extra/bond/per/atom 2 extra/angle/per/atom 1 extra/special/per/atom 2 mass 1 15.9994 mass 2 1.008 bond_style zero bond_coeff 1 0.9574 angle_style zero angle_coeff 1 104.52 region block1 block -80 80 -80 80 -80 80 region block2 block -70 70 -70 70 -70 70 create_atoms 0 random 5000 12345 block2 mol water 12345 overlap 2 thermo 1 thermo_style custom step time spcpu temp press etotal pe fix wall all wall/region block1 harmonic 1000.0 0.0 2.5 fix_modify wall energy yes pair_style lj/cut/coul/cut 8.0 pair_coeff 1 1 0.1521 3.1507 pair_coeff 2 2 0.0 1.0 velocity all create 300.0 12345 fix 1 all nvt temp 300 300 100.0 fix 2 all shake 0.001 10 10000 b 1 a 1 dump 2 all movie 10 wall.block.mpg type type size 1500 1500 fsaa yes dump_modify 2 pad 4 acolor * white/red/green/blue/aqua/magenta run 100