/* ---------------------------------------------------------------------- LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator http://lammps.sandia.gov, Sandia National Laboratories Steve Plimpton, sjplimp@sandia.gov Copyright (2003) Sandia Corporation. Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains certain rights in this software. This software is distributed under the GNU General Public License. See the README file in the top-level LAMMPS directory. ------------------------------------------------------------------------- */ /* ---------------------------------------------------------------------- Contributing author: Jonathan Lee (Sandia) ------------------------------------------------------------------------- */ #include #include "fix_wall_lj1043.h" #include "atom.h" #include "math_const.h" using namespace LAMMPS_NS; using namespace MathConst; /* ---------------------------------------------------------------------- */ FixWallLJ1043::FixWallLJ1043(LAMMPS *lmp, int narg, char **arg) : FixWall(lmp, narg, arg) { dynamic_group_allow = 1; } /* ---------------------------------------------------------------------- */ void FixWallLJ1043::precompute(int m) { coeff1[m] = MY_2PI * 2.0/5.0 * epsilon[m] * pow(sigma[m],10.0); coeff2[m] = MY_2PI * epsilon[m] * pow(sigma[m],4.0); coeff3[m] = MY_2PI * pow(2.0,1/2.0) / 3 * epsilon[m] * pow(sigma[m],3.0); coeff4[m] = 0.61 / pow(2.0,1/2.0) * sigma[m]; coeff5[m] = coeff1[m] * 10.0; coeff6[m] = coeff2[m] * 4.0; coeff7[m] = coeff3[m] * 3.0; double rinv = 1.0/cutoff[m]; double r2inv = rinv*rinv; double r4inv = r2inv*r2inv; offset[m] = coeff1[m]*r4inv*r4inv*r2inv - coeff2[m]*r4inv - coeff3[m]*pow(cutoff[m]+coeff4[m],-3.0); } /* ---------------------------------------------------------------------- */ void FixWallLJ1043::wall_particle(int m, int which, double coord) { double delta,rinv,r2inv,r4inv,r10inv,fwall; double vn; double **x = atom->x; double **f = atom->f; int *mask = atom->mask; int nlocal = atom->nlocal; int dim = which / 2; int side = which % 2; if (side == 0) side = -1; for (int i = 0; i < nlocal; i++) if (mask[i] & groupbit) { if (side < 0) delta = x[i][dim] - coord; else delta = coord - x[i][dim]; if (delta <= 0.0) continue; if (delta > cutoff[m]) continue; rinv = 1.0/delta; r2inv = rinv*rinv; r4inv = r2inv*r2inv; r10inv = r4inv*r4inv*r2inv; fwall = side * (coeff5[m]*r10inv*rinv - coeff6[m]*r4inv*rinv - coeff7[m]*pow(delta+coeff4[m],-4.0)); f[i][dim] -= fwall; ewall[0] += coeff1[m]*r10inv - coeff2[m]*r4inv - coeff3[m]*pow(delta+coeff4[m],-3.0) - offset[m]; ewall[m+1] += fwall; if (evflag) { if (side < 0) vn = -fwall*delta; else vn = fwall*delta; v_tally(dim, i, vn); } } }