LAMMPS (29 Jun 2012) # FENE beadspring benchmark units lj atom_style bond special_bonds fene read_data data.fene 1 = max bonds/atom orthogonal box = (-16.796 -16.796 -16.796) to (16.796 16.796 16.796) 1 by 2 by 2 MPI processor grid 32000 atoms 32000 velocities 31680 bonds 2 = max # of 1-2 neighbors 2 = max # of special neighbors neighbor 0.4 bin neigh_modify delay 5 every 1 bond_style fene bond_coeff 1 30.0 1.5 1.0 1.0 pair_style lj/cut 1.12 pair_modify shift yes pair_coeff 1 1 1.0 1.0 1.12 fix 1 all nve fix 2 all langevin 1.0 1.0 10.0 904297 timestep 0.012 run 100 Memory usage per processor = 4.85535 Mbytes Step Temp E_pair E_mol TotEng Press 0 0.97029772 0.44484087 20.494523 22.394765 4.6721833 100 0.9736748 0.44378481 20.502389 22.40664 4.7809557 Loop time of 0.242779 on 4 procs for 100 steps with 32000 atoms Pair time (%) = 0.0495595 (20.4134) Bond time (%) = 0.0221654 (9.12986) Neigh time (%) = 0.0930593 (38.3309) Comm time (%) = 0.019502 (8.03285) Outpt time (%) = 5.23329e-05 (0.0215558) Other time (%) = 0.0584403 (24.0714) Nlocal: 8000 ave 8023 max 7978 min Histogram: 1 0 0 0 1 1 0 0 0 1 Nghost: 4158.75 ave 4175 max 4145 min Histogram: 1 0 1 0 0 0 1 0 0 1 Neighs: 38940 ave 39184 max 38640 min Histogram: 1 0 0 0 0 1 1 0 0 1 Total # of neighbors = 155760 Ave neighs/atom = 4.8675 Ave special neighs/atom = 1.98 Neighbor list builds = 20 Dangerous builds = 20