# Gnuplot script to plot the energies. # #set term pngcairo size 800,600 solid color #set output 'energy_conservation.png' set term epslatex size 14cm,10cm standalone color set output 'energy_conservation.tex' E0S = 0.263720171785176 E0C = 0.680969247210183 E0T = 0.393139981206627 E0P = -1.16336568585219 E1S = 0.168915271276422 E1C = 0.615216219988708 E1T = 0.318731094092091 E1P = -1.29808304730092 set grid set xlabel 'Time (LJ units)' set ylabel 'Relative energy deviation $(\mathcal{H}(t) - \mathcal{H}(0))/\mathcal{H}(0)$' set title 'Energy drift for RATTLE-M on various surfaces' set key opaque box top left set log x col_S = '#CC0000' col_C = '#00CC00' col_T = '#0000CC' col_P = '#000000' set multiplot set xrange[10:5e6] set yrange[-0.02:0.02] set ytics ( "$-2.0~10^{-2}$" -2e-2, "$-1.5~10^{-2}$" -1.5e-2, "$-1.0~10^{-2}$" -1e-2 \ , "$-0.5~10^{-2}$" -0.5e-2, "$0$" 0, "$0.5~10^{-2}$" 0.5e-2, "$1.0~10^{-2}$" 1e-2 \ , "$1.5~10^{-2}$" 1.5e-2, "$2.0~10^{-2}$" 2e-2 ) plot 'long_run_lj_cut/thermo.sphere.dat' u 1:($4/E1S-1) w l lw 2 lc rgb col_S ti 'S, Truncated' \ , 'long_run_lj_cut/thermo.cylinder.dat' u 1:($4/E1C-1) w l lw 2 lc rgb col_C ti 'C, Truncated' \ , 'long_run_lj_cut/thermo.torus.dat' u 1:($4/E1T-1) w l lw 2 lc rgb col_T ti 'T, Truncated' \ , 'long_run_lj_cut/thermo.plane.dat' u 1:($4/E1P-1) w l lw 2 lc rgb col_P ti 'P, Truncated' \ , 'thermo.sphere.dat' u 1:($4/E0S-1) w p pt 2 ps 1 lc rgb col_S ti 'S, Smoothed' \ , 'thermo.cylinder.dat' u 1:($4/E0C-1) w p pt 4 ps 1 lc rgb col_C ti 'C, Smoothed' \ , 'thermo.torus.dat' u 1:($4/E0T-1) w p pt 6 ps 1 lc rgb col_T ti 'T, Smoothed' \ , 'thermo.plane.dat' u 1:($4/E0P-1) w p pt 8 ps 1 lc rgb col_P ti 'P, Smoothed' set origin 0.285,0.106 set size 0.55,0.4 set object 1 rectangle from graph 0,0 to graph 1,1 fillcolor rgb "white" behind set xlabel '' set ylabel '' set title '' set xrange[10:500000] set yrange[-1.5e-5:1.5e-5] set ytics set format y "%0.1t 10^{%T}" set grid unset key #set ytics ( "$-1.5~10^{-5}$" -1.5e-5, "$-1.0~10^{-5}$" -1e-5, "$-0.5~10^{-5}$" -0.5e-5, \ # "$0$" 0, "$0.5~10^{-5}$" 0.5e-5, "$1.0~10^{-5}$" 1.0e-5, "$1.5~10^{-5}$" 1.5e-5 ) set ytics ( "$-1.8~10^{-5}$" -1.8e-5, "$-1.2~10^{-5}$" -1.2e-5, "$-0.6~10^{-5}$" -0.6e-5, \ "$0$" 0, "$0.6~10^{-5}$" 0.6e-5, "$1.2~10^{-5}$" 1.2e-5, "$1.8~10^{-5}$" 1.8e-5 ) set title 'Smoothed only' offset 0,-0.5 plot 'thermo.sphere.dat' u 1:($4/E0S - 1) w p pt 2 ps 1 lc rgb col_S \ , 'thermo.cylinder.dat' u 1:($4/E0C - 1) w p pt 4 ps 1 lc rgb col_C \ , 'thermo.torus.dat' u 1:($4/E0T - 1) w p pt 6 ps 1 lc rgb col_T \ , 'thermo.plane.dat' u 1:($4/E0P - 1) w p pt 8 ps 1 lc rgb col_P unset multiplot