LAMMPS (5 Oct 2016) # REAX potential for ZnOH2 system # ..... units real atom_style charge read_data data.ZnOH2 orthogonal box = (0 0 0) to (25 25 25) 1 by 2 by 2 MPI processor grid reading atoms ... 105 atoms pair_style reax/c lmp_control pair_coeff * * ffield.reax.ZnOH H O Zn Reading potential file ffield.reax.ZnOH with DATE: 2011-02-18 neighbor 2 bin neigh_modify every 10 delay 0 check no fix 1 all nve fix 2 all qeq/reax 1 0.0 10.0 1e-6 param.qeq fix 3 all temp/berendsen 500.0 500.0 100.0 timestep 0.25 #dump 1 all atom 30 dump.reax.znoh run 3000 Neighbor list info ... 2 neighbor list requests update every 10 steps, delay 0 steps, check no max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 12 ghost atom cutoff = 12 binsize = 6 -> bins = 5 5 5 Memory usage per processor = 12.0066 Mbytes Step Temp E_pair E_mol TotEng Press 0 0 -7900.2668 0 -7900.2668 60.076093 3000 536.8256 -7935.1437 0 -7768.7255 -479.27959 Loop time of 3.77632 on 4 procs for 3000 steps with 105 atoms Performance: 17.160 ns/day, 1.399 hours/ns, 794.423 timesteps/s 99.0% CPU use with 4 MPI tasks x no OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 2.7337 | 2.7808 | 2.8316 | 2.5 | 73.64 Neigh | 0.13455 | 0.16558 | 0.19493 | 5.3 | 4.38 Comm | 0.046741 | 0.099375 | 0.14663 | 13.6 | 2.63 Output | 1.7881e-05 | 2.0027e-05 | 2.408e-05 | 0.1 | 0.00 Modify | 0.69792 | 0.7275 | 0.75887 | 2.5 | 19.26 Other | | 0.003084 | | | 0.08 Nlocal: 26.25 ave 45 max 15 min Histogram: 1 0 2 0 0 0 0 0 0 1 Nghost: 399 ave 509 max 295 min Histogram: 1 0 0 0 2 0 0 0 0 1 Neighs: 1150 ave 2061 max 701 min Histogram: 1 2 0 0 0 0 0 0 0 1 Total # of neighbors = 4600 Ave neighs/atom = 43.8095 Neighbor list builds = 300 Dangerous builds not checked Please see the log.cite file for references relevant to this simulation Total wall time: 0:00:04