variable sname index h2bulk log ${sname}.nve.log units electron newton on boundary p p p atom_style electron read_data data.${sname} pair_style eff/cut 30.627847 0 0 pair_coeff * * neigh_modify one 10000 page 100000 communicate single vel yes compute effTemp all temp/eff thermo 1000 thermo_style custom step pe temp press thermo_modify temp effTemp # structure minimization min_style cg minimize 0 1.0e-4 1000 10000 timestep 0.001 velocity all create 20000.0 4928459 rot yes mom yes dist gaussian # nve fix 1 all nve/eff #fix 2 all imd 8888 trate 1 unwrap on nowait on compute peatom all pe/atom compute keatom all ke/atom/eff dump 2 all xyz 1000 ${sname}.nve.xyz dump 3 all custom 1000 ${sname}.nve.lammpstrj id type x y z spin eradius c_peatom c_keatom run 100000 unfix 1 #unfix 2 undump 2 undump 3