LAMMPS (29 Jan 2012) # 3d Lennard-Jones melt variable x index 1 variable y index 1 variable z index 1 variable xx equal 20*$x variable xx equal 20*1 variable yy equal 20*$y variable yy equal 20*1 variable zz equal 20*$z variable zz equal 20*1 units metal atom_style atomic #newton off lattice fcc 4.4300 Lattice spacing in x,y,z = 4.43 4.43 4.43 region box block 0 ${xx} 0 ${yy} 0 ${zz} region box block 0 20 0 ${yy} 0 ${zz} region box block 0 20 0 20 0 ${zz} region box block 0 20 0 20 0 20 create_box 1 box Created orthogonal box = (0 0 0) to (88.6 88.6 88.6) 1 by 2 by 2 MPI processor grid create_atoms 1 box Created 32000 atoms pair_style lj/cut 8.1500 pair_coeff 1 1 0.0031 2.7400 pair_modify shift yes #pair_style kim model_Ne_P_LJ #pair_coeff * * Ne mass 1 20.18 velocity all create 200.0 232345 loop geom neighbor 0.3 bin neigh_modify delay 0 every 1 check yes fix 1 all nve #fix 1 all npt temp 1.0 1.0 1.0 iso 1.0 1.0 3.0 run 100 Memory usage per processor = 5.37051 Mbytes Step Temp E_pair E_mol TotEng Press 0 200 -741.55469 0 85.684388 -34.939092 100 108.37517 -362.56658 0 85.694308 3963.7892 Loop time of 0.99448 on 4 procs for 100 steps with 32000 atoms Pair time (%) = 0.83553 (84.0168) Neigh time (%) = 0.0916192 (9.21277) Comm time (%) = 0.0420563 (4.22897) Outpt time (%) = 7.64728e-05 (0.00768972) Other time (%) = 0.0251982 (2.53381) Nlocal: 8000 ave 8010 max 7989 min Histogram: 1 0 0 0 0 2 0 0 0 1 Nghost: 9240.25 ave 9249 max 9228 min Histogram: 1 0 0 0 1 0 0 0 0 2 Neighs: 472273 ave 473390 max 471652 min Histogram: 2 0 0 1 0 0 0 0 0 1 Total # of neighbors = 1889091 Ave neighs/atom = 59.0341 Neighbor list builds = 5 Dangerous builds = 0