// clang-format off /* ---------------------------------------------------------------------- * * *** Smooth Mach Dynamics *** * * This file is part of the MACHDYN package for LAMMPS. * Copyright (2014) Georg C. Ganzenmueller, georg.ganzenmueller@emi.fhg.de * Fraunhofer Ernst-Mach Institute for High-Speed Dynamics, EMI, * Eckerstrasse 4, D-79104 Freiburg i.Br, Germany. * * ----------------------------------------------------------------------- */ /* ---------------------------------------------------------------------- LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator https://www.lammps.org/, Sandia National Laboratories Steve Plimpton, sjplimp@sandia.gov Copyright (2003) Sandia Corporation. Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains certain rights in this software. This software is distributed under the GNU General Public License. See the README file in the top-level LAMMPS directory. ------------------------------------------------------------------------- */ #include "compute_smd_vol.h" #include #include "atom.h" #include "update.h" #include "modify.h" #include "comm.h" #include "memory.h" #include "error.h" using namespace LAMMPS_NS; /* ---------------------------------------------------------------------- */ ComputeSMDVol::ComputeSMDVol(LAMMPS *lmp, int narg, char **arg) : Compute(lmp, narg, arg) { if (narg != 3) error->all(FLERR, "Illegal compute smd/volume command"); if (atom->vfrac_flag != 1) error->all(FLERR, "compute smd/volume command requires atom_style with density (e.g. smd)"); scalar_flag = 1; peratom_flag = 1; size_peratom_cols = 0; nmax = 0; volVector = nullptr; } /* ---------------------------------------------------------------------- */ ComputeSMDVol::~ComputeSMDVol() { memory->sfree(volVector); } /* ---------------------------------------------------------------------- */ void ComputeSMDVol::init() { int count = 0; for (int i = 0; i < modify->ncompute; i++) if (strcmp(modify->compute[i]->style, "smd/volume") == 0) count++; if (count > 1 && comm->me == 0) error->warning(FLERR, "More than one compute smd/volume"); } /* ---------------------------------------------------------------------- */ void ComputeSMDVol::compute_peratom() { invoked_peratom = update->ntimestep; // grow volVector array if necessary if (atom->nmax > nmax) { memory->sfree(volVector); nmax = atom->nmax; volVector = (double *) memory->smalloc(nmax * sizeof(double), "atom:volVector"); vector_atom = volVector; } double *vfrac = atom->vfrac; int *mask = atom->mask; int nlocal = atom->nlocal; for (int i = 0; i < nlocal; i++) { if (mask[i] & groupbit) { volVector[i] = vfrac[i]; } else { volVector[i] = 0.0; } } } /* ---------------------------------------------------------------------- */ double ComputeSMDVol::compute_scalar() { invoked_scalar = update->ntimestep; double *vfrac = atom->vfrac; int *mask = atom->mask; int nlocal = atom->nlocal; double this_proc_sum_volumes = 0.0; for (int i = 0; i < nlocal; i++) { if (mask[i] & groupbit) { this_proc_sum_volumes += vfrac[i]; } } //printf("this_proc_sum_volumes = %g\n", this_proc_sum_volumes); MPI_Allreduce(&this_proc_sum_volumes, &scalar, 1, MPI_DOUBLE, MPI_SUM, world); //if (comm->me == 0) printf("global sum_volumes = %g\n", scalar); return scalar; } /* ---------------------------------------------------------------------- memory usage of local atom-based array ------------------------------------------------------------------------- */ double ComputeSMDVol::memory_usage() { double bytes = (double)nmax * sizeof(double); return bytes; }