/* -*- c++ -*- ---------------------------------------------------------- LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator http://lammps.sandia.gov, Sandia National Laboratories Steve Plimpton, sjplimp@sandia.gov Copyright (2003) Sandia Corporation. Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains certain rights in this software. This software is distributed under the GNU General Public License. See the README file in the top-level LAMMPS directory. ------------------------------------------------------------------------- */ #ifdef COMPUTE_CLASS ComputeStyle(rdf,ComputeRDF) #else #ifndef LMP_COMPUTE_RDF_H #define LMP_COMPUTE_RDF_H #include "compute.h" namespace LAMMPS_NS { class ComputeRDF : public Compute { public: ComputeRDF(class LAMMPS *, int, char **); ~ComputeRDF(); void init(); void init_list(int, class NeighList *); void compute_array(); private: int nbin; // # of rdf bins int cutflag; // user cutoff flag int npairs; // # of rdf pairs double delr,delrinv; // bin width and its inverse double cutoff_user; // user-specified cutoff double mycutneigh; // user-specified cutoff + neighbor skin int ***rdfpair; // map 2 type pair to rdf pair for each histo int **nrdfpair; // # of histograms for each type pair int *ilo,*ihi,*jlo,*jhi; double **hist; // histogram bins double **histall; // summed histogram bins across all procs int *typecount; int *icount,*jcount; int *duplicates; class NeighList *list; // half neighbor list void init_norm(); bigint natoms_old; }; } #endif #endif /* ERROR/WARNING messages: E: Illegal ... command Self-explanatory. Check the input script syntax and compare to the documentation for the command. You can use -echo screen as a command-line option when running LAMMPS to see the offending line. E: Compute rdf requires a pair style be defined or cutoff specified UNDOCUMENTED E: Compure rdf cutoff exceeds ghost atom range - use comm_modify cutoff command UNDOCUMENTED W: Compute rdf cutoff less than neighbor cutoff - forcing a needless neighbor list build UNDOCUMENTED U: Compute rdf requires a pair style be defined Self-explanatory. */