// clang-format off /* ---------------------------------------------------------------------- LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator https://www.lammps.org/, Sandia National Laboratories LAMMPS development team: developers@lammps.org Copyright (2003) Sandia Corporation. Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains certain rights in this software. This software is distributed under the GNU General Public License. See the README file in the top-level LAMMPS directory. ------------------------------------------------------------------------- */ /* ---------------------------------------------------------------------- Contributing author: Tony Sheh (U Michigan), Trung Dac Nguyen (U Michigan) references: Kamberaj et al., J. Chem. Phys. 122, 224114 (2005) Miller et al., J Chem Phys. 116, 8649-8659 (2002) ------------------------------------------------------------------------- */ #include "fix_rigid_npt.h" #include "error.h" #include "modify.h" using namespace LAMMPS_NS; /* ---------------------------------------------------------------------- */ FixRigidNPT::FixRigidNPT(LAMMPS *lmp, int narg, char **arg) : FixRigidNH(lmp, narg, arg) { // other setting are made by parent scalar_flag = 1; restart_global = 1; extscalar = 1; // error checks if (tstat_flag == 0 || pstat_flag == 0) error->all(FLERR,"Did not set temperature or pressure for fix rigid/npt"); if (t_start <= 0.0 || t_stop <= 0.0) error->all(FLERR,"Target temperature for fix rigid/npt cannot be 0.0"); if (t_period <= 0.0) error->all(FLERR,"Fix rigid/npt period must be > 0.0"); // thermostat chain parameters if (t_chain < 1) error->all(FLERR,"Illegal fix rigid/npt command"); if (t_iter < 1) error->all(FLERR,"Illegal fix rigid/npt command"); if (t_order != 3 && t_order != 5) error->all(FLERR,"Fix rigid/npt temperature order must be 3 or 5"); // convert input periods to frequency t_freq = 0.0; p_freq[0] = p_freq[1] = p_freq[2] = 0.0; t_freq = 1.0 / t_period; if (p_flag[0]) p_freq[0] = 1.0 / p_period[0]; if (p_flag[1]) p_freq[1] = 1.0 / p_period[1]; if (p_flag[2]) p_freq[2] = 1.0 / p_period[2]; // create a new compute temp style // id = fix-ID + temp // compute group = all since pressure is always global (group all) // and thus its KE/temperature contribution should use group all id_temp = utils::strdup(std::string(id)+"_temp"); modify->add_compute(fmt::format("{} all temp",id_temp)); tcomputeflag = 1; // create a new compute pressure style // id = fix-ID + press, compute group = all // pass id_temp as 4th arg to pressure constructor id_press = utils::strdup(std::string(id)+"_press"); modify->add_compute(fmt::format("{} all pressure {}",id_press,id_temp)); pcomputeflag = 1; }