/* ---------------------------------------------------------------------- LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator http://lammps.sandia.gov, Sandia National Laboratories Steve Plimpton, sjplimp@sandia.gov Copyright (2003) Sandia Corporation. Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains certain rights in this software. This software is distributed under the GNU General Public License. See the README file in the top-level LAMMPS directory. ------------------------------------------------------------------------- */ /* ---------------------------------------------------------------------- Contributing author: Mike Brown (ORNL) ------------------------------------------------------------------------- */ #include #include #include #include #include "pair_sw_gpu.h" #include "atom.h" #include "neighbor.h" #include "neigh_request.h" #include "force.h" #include "comm.h" #include "memory.h" #include "neighbor.h" #include "neigh_list.h" #include "memory.h" #include "error.h" #include "domain.h" #include "gpu_extra.h" using namespace LAMMPS_NS; // External functions from cuda library for atom decomposition int sw_gpu_init(const int ntypes, const int inum, const int nall, const int max_nbors, const double cell_size, int &gpu_mode, FILE *screen, int* host_map, const int nelements, int*** host_elem2param, const int nparams, const double* sw_epsilon, const double* sw_sigma, const double* sw_lambda, const double* sw_gamma, const double* sw_costheta, const double* sw_biga, const double* sw_bigb, const double* sw_powerp, const double* sw_powerq, const double* sw_cut, const double* sw_cutsq); void sw_gpu_clear(); int ** sw_gpu_compute_n(const int ago, const int inum, const int nall, double **host_x, int *host_type, double *sublo, double *subhi, tagint *tag, int **nspecial, tagint **special, const bool eflag, const bool vflag, const bool eatom, const bool vatom, int &host_start, int **ilist, int **jnum, const double cpu_time, bool &success); void sw_gpu_compute(const int ago, const int nloc, const int nall, const int ln, double **host_x, int *host_type, int *ilist, int *numj, int **firstneigh, const bool eflag, const bool vflag, const bool eatom, const bool vatom, int &host_start, const double cpu_time, bool &success); double sw_gpu_bytes(); extern double lmp_gpu_forces(double **f, double **tor, double *eatom, double **vatom, double *virial, double &ecoul); #define MAXLINE 1024 #define DELTA 4 /* ---------------------------------------------------------------------- */ PairSWGPU::PairSWGPU(LAMMPS *lmp) : PairSW(lmp), gpu_mode(GPU_FORCE) { cpu_time = 0.0; reinitflag = 0; GPU_EXTRA::gpu_ready(lmp->modify, lmp->error); cutghost = NULL; ghostneigh = 1; } /* ---------------------------------------------------------------------- check if allocated, since class can be destructed when incomplete ------------------------------------------------------------------------- */ PairSWGPU::~PairSWGPU() { sw_gpu_clear(); if (allocated) memory->destroy(cutghost); } /* ---------------------------------------------------------------------- */ void PairSWGPU::compute(int eflag, int vflag) { if (eflag || vflag) ev_setup(eflag,vflag); else evflag = vflag_fdotr = 0; int nall = atom->nlocal + atom->nghost; int inum, host_start; bool success = true; int *ilist, *numneigh, **firstneigh; if (gpu_mode != GPU_FORCE) { inum = atom->nlocal; firstneigh = sw_gpu_compute_n(neighbor->ago, inum, nall, atom->x, atom->type, domain->sublo, domain->subhi, atom->tag, atom->nspecial, atom->special, eflag, vflag, eflag_atom, vflag_atom, host_start, &ilist, &numneigh, cpu_time, success); } else { inum = list->inum; ilist = list->ilist; numneigh = list->numneigh; firstneigh = list->firstneigh; sw_gpu_compute(neighbor->ago, inum, nall, inum+list->gnum, atom->x, atom->type, ilist, numneigh, firstneigh, eflag, vflag, eflag_atom, vflag_atom, host_start, cpu_time, success); } if (!success) error->one(FLERR,"Insufficient memory on accelerator"); } /* ---------------------------------------------------------------------- */ void PairSWGPU::allocate() { PairSW::allocate(); int n = atom->ntypes; memory->create(cutghost,n+1,n+1,"pair:cutghost"); } /* ---------------------------------------------------------------------- init specific to this pair style ------------------------------------------------------------------------- */ void PairSWGPU::init_style() { double cell_size = cutmax + neighbor->skin; if (atom->tag_enable == 0) error->all(FLERR,"Pair style sw/gpu requires atom IDs"); if (force->newton_pair != 0) error->all(FLERR,"Pair style sw/gpu requires newton pair off"); double *epsilon, *sigma, *lambda, *gamma; double *biga, *bigb, *powerp, *powerq; double *_cut, *_cutsq, *costheta; epsilon = sigma = lambda = gamma = NULL; biga = bigb = powerp = powerq = NULL; _cut = _cutsq = costheta = NULL; memory->create(epsilon,nparams,"pair:epsilon"); memory->create(sigma,nparams,"pair:sigma"); memory->create(lambda,nparams,"pair:lambda"); memory->create(gamma,nparams,"pair:gamma"); memory->create(biga,nparams,"pair:biga"); memory->create(bigb,nparams,"pair:bigb"); memory->create(powerp,nparams,"pair:powerp"); memory->create(powerq,nparams,"pair:powerq"); memory->create(_cut,nparams,"pair:_cut"); memory->create(_cutsq,nparams,"pair:_cutsq"); memory->create(costheta,nparams,"pair:costheta"); for (int i = 0; i < nparams; i++) { epsilon[i] = params[i].epsilon; sigma[i] = params[i].sigma; lambda[i] = params[i].lambda; gamma[i] = params[i].gamma; biga[i] = params[i].biga; bigb[i] = params[i].bigb; powerp[i] = params[i].powerp; powerq[i] = params[i].powerq; _cut[i] = params[i].cut; _cutsq[i] = params[i].cutsq; costheta[i] = params[i].costheta; } int success = sw_gpu_init(atom->ntypes+1, atom->nlocal, atom->nlocal+atom->nghost, 300, cell_size, gpu_mode, screen, map, nelements, elem2param, nparams, epsilon, sigma, lambda, gamma, costheta, biga, bigb, powerp, powerq, _cut, _cutsq); memory->destroy(epsilon); memory->destroy(sigma); memory->destroy(lambda); memory->destroy(gamma); memory->destroy(biga); memory->destroy(bigb); memory->destroy(powerp); memory->destroy(powerq); memory->destroy(_cut); memory->destroy(_cutsq); memory->destroy(costheta); GPU_EXTRA::check_flag(success,error,world); if (gpu_mode == GPU_FORCE) { int irequest = neighbor->request(this,instance_me); neighbor->requests[irequest]->half = 0; neighbor->requests[irequest]->full = 1; neighbor->requests[irequest]->ghost = 1; } if (comm->cutghostuser < (2.0*cutmax + neighbor->skin) ) comm->cutghostuser=2.0*cutmax + neighbor->skin; } /* ---------------------------------------------------------------------- init for one type pair i,j and corresponding j,i ------------------------------------------------------------------------- */ double PairSWGPU::init_one(int i, int j) { if (setflag[i][j] == 0) error->all(FLERR,"All pair coeffs are not set"); cutghost[i][j] = cutmax; cutghost[j][i] = cutmax; return cutmax; }