LAMMPS (7 Jan 2012) using 4 OpenMP thread(s) per MPI task package gpu force 0 0 1 threads_per_atom 1 variable x index 1 variable y index 1 variable z index 1 variable xx equal 10*$x variable xx equal 10*1 variable yy equal 10*$y variable yy equal 10*1 variable zz equal 10*$z variable zz equal 10*1 units lj atom_style charge newton off lattice fcc 0.8442 Lattice spacing in x,y,z = 1.6796 1.6796 1.6796 region box block 0 ${xx} 0 ${yy} 0 ${zz} region box block 0 10 0 ${yy} 0 ${zz} region box block 0 10 0 10 0 ${zz} region box block 0 10 0 10 0 10 region half block 0 ${xx} 0 ${yy} 0 4.5 region half block 0 10 0 ${yy} 0 4.5 region half block 0 10 0 10 0 4.5 create_box 2 box Created orthogonal box = (0 0 0) to (16.796 16.796 16.796) 1 by 1 by 3 MPI processor grid create_atoms 1 box Created 4000 atoms group ga region box 4000 atoms in group ga group gp region half 2000 atoms in group gp group gn subtract ga gp 2000 atoms in group gn set group gp charge 0.5 2000 settings made for charge set group gn charge -0.5 2000 settings made for charge set group gn type 2 2000 settings made for type mass 1 1.0 mass 2 1.1 velocity all create 1.44 87287 loop geom pair_style hybrid lj/cut/coul/cut/gpu 2.5 5.0 lj/cut/gpu 2.5 pair_coeff 1 1 lj/cut/coul/cut/gpu 1.0 1.0 pair_coeff 1 2 lj/cut/gpu 0.95 0.9 pair_coeff 2 2 lj/cut/gpu 0.8 0.85 neighbor 0.3 bin neigh_modify delay 0 every 20 check no fix 1 all nve timestep 0.003 thermo 100 thermo_style custom step temp evdwl ecoul epair etotal press run 400 Memory usage per processor = 13.5429 Mbytes Step Temp E_vdwl E_coul E_pair TotEng Press 0 1.44 -4.6540199 6.3791908 1.7251709 3.8846309 -2.0514253 100 1.0830806 -4.0735103 6.332036 2.2585257 3.8827405 2.5584308 200 1.1137353 -4.0370695 6.1287 2.0916305 3.7618158 2.4922113 300 1.1445401 -4.0049798 5.9348997 1.9299199 3.6463009 2.3969638 400 1.1489664 -3.9370676 5.7552156 1.8181481 3.5411668 2.4666048 Loop time of 1.9586 on 12 procs (3 MPI x 4 OpenMP) for 400 steps with 4000 atoms Pair time (%) = 0.985229 (50.3027) Neigh time (%) = 0.568149 (29.0079) Comm time (%) = 0.384278 (19.62) Outpt time (%) = 0.00884287 (0.451489) Other time (%) = 0.0121009 (0.617832) Nlocal: 1333.33 ave 1438 max 1178 min Histogram: 1 0 0 0 0 0 0 1 0 1 Nghost: 8991.33 ave 9026 max 8954 min Histogram: 1 0 0 0 0 1 0 0 0 1 Neighs: 0 ave 0 max 0 min Histogram: 3 0 0 0 0 0 0 0 0 0 FullNghs: 304529 ave 476695 max 162383 min Histogram: 1 0 0 1 0 0 0 0 0 1 Total # of neighbors = 913586 Ave neighs/atom = 228.397 Neighbor list builds = 20 Dangerous builds = 0