/* ---------------------------------------------------------------------- LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator http://lammps.sandia.gov, Sandia National Laboratories Steve Plimpton, sjplimp@sandia.gov Copyright (2003) Sandia Corporation. Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains certain rights in this software. This software is distributed under the GNU General Public License. See the README file in the top-level LAMMPS directory. ------------------------------------------------------------------------- */ /* ---------------------------------------------------------------------- Contributing author: Ray Shan (Materials Design) ------------------------------------------------------------------------- */ #include #include #include "dihedral_class2_kokkos.h" #include "atom_kokkos.h" #include "comm.h" #include "neighbor_kokkos.h" #include "domain.h" #include "force.h" #include "update.h" #include "memory_kokkos.h" #include "error.h" #include "atom_masks.h" using namespace LAMMPS_NS; #define TOLERANCE 0.05 #define SMALL 0.001 #define SMALLER 0.00001 /* ---------------------------------------------------------------------- */ template DihedralClass2Kokkos::DihedralClass2Kokkos(LAMMPS *lmp) : DihedralClass2(lmp) { atomKK = (AtomKokkos *) atom; neighborKK = (NeighborKokkos *) neighbor; execution_space = ExecutionSpaceFromDevice::space; datamask_read = X_MASK | F_MASK | Q_MASK | ENERGY_MASK | VIRIAL_MASK; datamask_modify = F_MASK | ENERGY_MASK | VIRIAL_MASK; k_warning_flag = DAT::tdual_int_scalar("Dihedral:warning_flag"); d_warning_flag = k_warning_flag.view(); h_warning_flag = k_warning_flag.h_view; } /* ---------------------------------------------------------------------- */ template DihedralClass2Kokkos::~DihedralClass2Kokkos() { if (!copymode) { memoryKK->destroy_kokkos(k_eatom,eatom); memoryKK->destroy_kokkos(k_vatom,vatom); } } /* ---------------------------------------------------------------------- */ template void DihedralClass2Kokkos::compute(int eflag_in, int vflag_in) { eflag = eflag_in; vflag = vflag_in; if (eflag || vflag) ev_setup(eflag,vflag,0); else evflag = 0; // reallocate per-atom arrays if necessary if (eflag_atom) { memoryKK->destroy_kokkos(k_eatom,eatom); memoryKK->create_kokkos(k_eatom,eatom,maxeatom,"dihedral:eatom"); d_eatom = k_eatom.template view(); } if (vflag_atom) { memoryKK->destroy_kokkos(k_vatom,vatom); memoryKK->create_kokkos(k_vatom,vatom,maxvatom,6,"dihedral:vatom"); d_vatom = k_vatom.template view(); } //atomKK->sync(execution_space,datamask_read); k_k1.template sync(); k_k2.template sync(); k_k3.template sync(); k_phi1.template sync(); k_phi2.template sync(); k_phi3.template sync(); k_mbt_f1.template sync(); k_mbt_f2.template sync(); k_mbt_f3.template sync(); k_mbt_r0.template sync(); k_ebt_f1_1.template sync(); k_ebt_f2_1.template sync(); k_ebt_f3_1.template sync(); k_ebt_r0_1.template sync(); k_ebt_f1_2.template sync(); k_ebt_f2_2.template sync(); k_ebt_f3_2.template sync(); k_ebt_r0_2.template sync(); k_at_f1_1.template sync(); k_at_f2_1.template sync(); k_at_f3_1.template sync(); k_at_f1_2.template sync(); k_at_f2_2.template sync(); k_at_f3_2.template sync(); k_at_theta0_1.template sync(); k_at_theta0_2.template sync(); k_aat_k.template sync(); k_aat_theta0_1.template sync(); k_aat_theta0_2.template sync(); k_bb13t_k.template sync(); k_bb13t_r10.template sync(); k_bb13t_r30.template sync(); k_setflag_d.template sync(); k_setflag_mbt.template sync(); k_setflag_ebt.template sync(); k_setflag_at.template sync(); k_setflag_aat.template sync(); k_setflag_bb13t.template sync(); //if (eflag || vflag) atomKK->modified(execution_space,datamask_modify); //else atomKK->modified(execution_space,F_MASK); x = atomKK->k_x.view(); f = atomKK->k_f.view(); neighborKK->k_dihedrallist.template sync(); dihedrallist = neighborKK->k_dihedrallist.view(); int ndihedrallist = neighborKK->ndihedrallist; nlocal = atom->nlocal; newton_bond = force->newton_bond; h_warning_flag() = 0; k_warning_flag.template modify(); k_warning_flag.template sync(); copymode = 1; // loop over neighbors of my atoms EV_FLOAT ev; if (evflag) { if (newton_bond) { Kokkos::parallel_reduce(Kokkos::RangePolicy >(0,ndihedrallist),*this,ev); } else { Kokkos::parallel_reduce(Kokkos::RangePolicy >(0,ndihedrallist),*this,ev); } } else { if (newton_bond) { Kokkos::parallel_for(Kokkos::RangePolicy >(0,ndihedrallist),*this); } else { Kokkos::parallel_for(Kokkos::RangePolicy >(0,ndihedrallist),*this); } } // error check k_warning_flag.template modify(); k_warning_flag.template sync(); if (h_warning_flag()) error->warning(FLERR,"Dihedral problem",0); if (eflag_global) energy += ev.evdwl; if (vflag_global) { virial[0] += ev.v[0]; virial[1] += ev.v[1]; virial[2] += ev.v[2]; virial[3] += ev.v[3]; virial[4] += ev.v[4]; virial[5] += ev.v[5]; } if (eflag_atom) { k_eatom.template modify(); k_eatom.template sync(); } if (vflag_atom) { k_vatom.template modify(); k_vatom.template sync(); } copymode = 0; } /* ---------------------------------------------------------------------- */ template template KOKKOS_INLINE_FUNCTION void DihedralClass2Kokkos::operator()(TagDihedralClass2Compute, const int &n, EV_FLOAT& ev) const { // The f array is atomic Kokkos::View > a_f = f; const int i1 = dihedrallist(n,0); const int i2 = dihedrallist(n,1); const int i3 = dihedrallist(n,2); const int i4 = dihedrallist(n,3); const int type = dihedrallist(n,4); // 1st bond const F_FLOAT vb1x = x(i1,0) - x(i2,0); const F_FLOAT vb1y = x(i1,1) - x(i2,1); const F_FLOAT vb1z = x(i1,2) - x(i2,2); // 2nd bond const F_FLOAT vb2x = x(i3,0) - x(i2,0); const F_FLOAT vb2y = x(i3,1) - x(i2,1); const F_FLOAT vb2z = x(i3,2) - x(i2,2); const F_FLOAT vb2xm = -vb2x; const F_FLOAT vb2ym = -vb2y; const F_FLOAT vb2zm = -vb2z; // 3rd bond const F_FLOAT vb3x = x(i4,0) - x(i3,0); const F_FLOAT vb3y = x(i4,1) - x(i3,1); const F_FLOAT vb3z = x(i4,2) - x(i3,2); // distance: c0 calculation const F_FLOAT r1mag2 = vb1x*vb1x + vb1y*vb1y + vb1z*vb1z; const F_FLOAT r1 = sqrt(r1mag2); const F_FLOAT r2mag2 = vb2x*vb2x + vb2y*vb2y + vb2z*vb2z; const F_FLOAT r2 = sqrt(r2mag2); const F_FLOAT r3mag2 = vb3x*vb3x + vb3y*vb3y + vb3z*vb3z; const F_FLOAT r3 = sqrt(r3mag2); const F_FLOAT sb1 = 1.0/r1mag2; const F_FLOAT rb1 = 1.0/r1; const F_FLOAT sb2 = 1.0/r2mag2; const F_FLOAT rb2 = 1.0/r2; const F_FLOAT sb3 = 1.0/r3mag2; const F_FLOAT rb3 = 1.0/r3; const F_FLOAT c0 = (vb1x*vb3x + vb1y*vb3y + vb1z*vb3z) * rb1*rb3; // 1st and 2nd angle const F_FLOAT r12c1 = rb1*rb2; const F_FLOAT r12c2 = rb2*rb3; const F_FLOAT costh12 = (vb1x*vb2x + vb1y*vb2y + vb1z*vb2z) * r12c1; const F_FLOAT costh13 = c0; const F_FLOAT costh23 = (vb2xm*vb3x + vb2ym*vb3y + vb2zm*vb3z) * r12c2; // cos and sin of 2 angles and final c F_FLOAT sin2 = MAX(1.0 - costh12*costh12,0.0); F_FLOAT sc1 = sqrt(sin2); if (sc1 < SMALL) sc1 = SMALL; sc1 = 1.0/sc1; sin2 = MAX(1.0 - costh23*costh23,0.0); F_FLOAT sc2 = sqrt(sin2); if (sc2 < SMALL) sc2 = SMALL; sc2 = 1.0/sc2; const F_FLOAT s1 = sc1 * sc1; const F_FLOAT s2 = sc2 * sc2; const F_FLOAT s12 = sc1 * sc2; F_FLOAT c = (c0 + costh12*costh23) * s12; // error check if ((c > 1.0 + TOLERANCE || c < (-1.0 - TOLERANCE)) && !d_warning_flag()) Kokkos::atomic_fetch_add(&d_warning_flag(),1); if (c > 1.0) c = 1.0; if (c < -1.0) c = -1.0; const F_FLOAT cosphi = c; F_FLOAT phi = acos(c); F_FLOAT sinphi = sqrt(1.0 - c*c); sinphi = MAX(sinphi,SMALL); // n123 = vb1 x vb2 const F_FLOAT n123x = vb1y*vb2z - vb1z*vb2y; const F_FLOAT n123y = vb1z*vb2x - vb1x*vb2z; const F_FLOAT n123z = vb1x*vb2y - vb1y*vb2x; const F_FLOAT n123_dot_vb3 = n123x*vb3x + n123y*vb3y + n123z*vb3z; if (n123_dot_vb3 > 0.0) { phi = -phi; sinphi = -sinphi; } const F_FLOAT a11 = -c*sb1*s1; const F_FLOAT a22 = sb2 * (2.0*costh13*s12 - c*(s1+s2)); const F_FLOAT a33 = -c*sb3*s2; const F_FLOAT a12 = r12c1 * (costh12*c*s1 + costh23*s12); const F_FLOAT a13 = rb1*rb3*s12; const F_FLOAT a23 = r12c2 * (-costh23*c*s2 - costh12*s12); const F_FLOAT sx1 = a11*vb1x + a12*vb2x + a13*vb3x; const F_FLOAT sx2 = a12*vb1x + a22*vb2x + a23*vb3x; const F_FLOAT sx12 = a13*vb1x + a23*vb2x + a33*vb3x; const F_FLOAT sy1 = a11*vb1y + a12*vb2y + a13*vb3y; const F_FLOAT sy2 = a12*vb1y + a22*vb2y + a23*vb3y; const F_FLOAT sy12 = a13*vb1y + a23*vb2y + a33*vb3y; const F_FLOAT sz1 = a11*vb1z + a12*vb2z + a13*vb3z; const F_FLOAT sz2 = a12*vb1z + a22*vb2z + a23*vb3z; const F_FLOAT sz12 = a13*vb1z + a23*vb2z + a33*vb3z; // set up d(cos(phi))/d(r) and dphi/dr arrays F_FLOAT dcosphidr[4][3], dphidr[4][3]; dcosphidr[0][0] = -sx1; dcosphidr[0][1] = -sy1; dcosphidr[0][2] = -sz1; dcosphidr[1][0] = sx2 + sx1; dcosphidr[1][1] = sy2 + sy1; dcosphidr[1][2] = sz2 + sz1; dcosphidr[2][0] = sx12 - sx2; dcosphidr[2][1] = sy12 - sy2; dcosphidr[2][2] = sz12 - sz2; dcosphidr[3][0] = -sx12; dcosphidr[3][1] = -sy12; dcosphidr[3][2] = -sz12; for (int i = 0; i < 4; i++) for (int j = 0; j < 3; j++) dphidr[i][j] = -dcosphidr[i][j] / sinphi; // energy F_FLOAT edihedral = 0.0; const F_FLOAT dphi1 = phi - d_phi1[type]; const F_FLOAT dphi2 = 2.0*phi - d_phi2[type]; const F_FLOAT dphi3 = 3.0*phi - d_phi3[type]; if (eflag) edihedral = d_k1[type]*(1.0 - cos(dphi1)) + d_k2[type]*(1.0 - cos(dphi2)) + d_k3[type]*(1.0 - cos(dphi3)); const F_FLOAT de_dihedral = d_k1[type]*sin(dphi1) + 2.0*d_k2[type]*sin(dphi2) + 3.0*d_k3[type]*sin(dphi3); // torsion forces on all 4 atoms F_FLOAT dbonddr[3][4][3], fabcd[4][3]; for (int i = 0; i < 4; i++) for (int j = 0; j < 3; j++) fabcd[i][j] = de_dihedral*dphidr[i][j]; // set up d(bond)/d(r) array // dbonddr(i,j,k) = bond i, atom j, coordinate k for (int i = 0; i < 3; i++) for (int j = 0; j < 4; j++) for (int k = 0; k < 3; k++) dbonddr[i][j][k] = 0.0; // bond1 dbonddr[0][0][0] = vb1x / r1; dbonddr[0][0][1] = vb1y / r1; dbonddr[0][0][2] = vb1z / r1; dbonddr[0][1][0] = -vb1x / r1; dbonddr[0][1][1] = -vb1y / r1; dbonddr[0][1][2] = -vb1z / r1; // bond2 dbonddr[1][1][0] = vb2x / r2; dbonddr[1][1][1] = vb2y / r2; dbonddr[1][1][2] = vb2z / r2; dbonddr[1][2][0] = -vb2x / r2; dbonddr[1][2][1] = -vb2y / r2; dbonddr[1][2][2] = -vb2z / r2; // bond3 dbonddr[2][2][0] = vb3x / r3; dbonddr[2][2][1] = vb3y / r3; dbonddr[2][2][2] = vb3z / r3; dbonddr[2][3][0] = -vb3x / r3; dbonddr[2][3][1] = -vb3y / r3; dbonddr[2][3][2] = -vb3z / r3; // set up d(theta)/d(r) array // dthetadr(i,j,k) = angle i, atom j, coordinate k F_FLOAT dthetadr[2][4][3]; for (int i = 0; i < 2; i++) for (int j = 0; j < 4; j++) for (int k = 0; k < 3; k++) dthetadr[i][j][k] = 0.0; const F_FLOAT t1 = costh12 / r1mag2; const F_FLOAT t2 = costh23 / r2mag2; const F_FLOAT t3 = costh12 / r2mag2; const F_FLOAT t4 = costh23 / r3mag2; // angle12 dthetadr[0][0][0] = sc1 * ((t1 * vb1x) - (vb2x * r12c1)); dthetadr[0][0][1] = sc1 * ((t1 * vb1y) - (vb2y * r12c1)); dthetadr[0][0][2] = sc1 * ((t1 * vb1z) - (vb2z * r12c1)); dthetadr[0][1][0] = sc1 * ((-t1 * vb1x) + (vb2x * r12c1) + (-t3 * vb2x) + (vb1x * r12c1)); dthetadr[0][1][1] = sc1 * ((-t1 * vb1y) + (vb2y * r12c1) + (-t3 * vb2y) + (vb1y * r12c1)); dthetadr[0][1][2] = sc1 * ((-t1 * vb1z) + (vb2z * r12c1) + (-t3 * vb2z) + (vb1z * r12c1)); dthetadr[0][2][0] = sc1 * ((t3 * vb2x) - (vb1x * r12c1)); dthetadr[0][2][1] = sc1 * ((t3 * vb2y) - (vb1y * r12c1)); dthetadr[0][2][2] = sc1 * ((t3 * vb2z) - (vb1z * r12c1)); // angle23 dthetadr[1][1][0] = sc2 * ((t2 * vb2x) + (vb3x * r12c2)); dthetadr[1][1][1] = sc2 * ((t2 * vb2y) + (vb3y * r12c2)); dthetadr[1][1][2] = sc2 * ((t2 * vb2z) + (vb3z * r12c2)); dthetadr[1][2][0] = sc2 * ((-t2 * vb2x) - (vb3x * r12c2) + (t4 * vb3x) + (vb2x * r12c2)); dthetadr[1][2][1] = sc2 * ((-t2 * vb2y) - (vb3y * r12c2) + (t4 * vb3y) + (vb2y * r12c2)); dthetadr[1][2][2] = sc2 * ((-t2 * vb2z) - (vb3z * r12c2) + (t4 * vb3z) + (vb2z * r12c2)); dthetadr[1][3][0] = -sc2 * ((t4 * vb3x) + (vb2x * r12c2)); dthetadr[1][3][1] = -sc2 * ((t4 * vb3y) + (vb2y * r12c2)); dthetadr[1][3][2] = -sc2 * ((t4 * vb3z) + (vb2z * r12c2)); // mid-bond/torsion coupling // energy on bond2 (middle bond) F_FLOAT cos2phi = cos(2.0*phi); F_FLOAT cos3phi = cos(3.0*phi); F_FLOAT bt1 = d_mbt_f1[type] * cosphi; F_FLOAT bt2 = d_mbt_f2[type] * cos2phi; F_FLOAT bt3 = d_mbt_f3[type] * cos3phi; F_FLOAT sumbte = bt1 + bt2 + bt3; F_FLOAT db = r2 - d_mbt_r0[type]; if (eflag) edihedral += db * sumbte; // force on bond2 bt1 = -d_mbt_f1[type] * sinphi; bt2 = -2.0 * d_mbt_f2[type] * sin(2.0*phi); bt3 = -3.0 * d_mbt_f3[type] * sin(3.0*phi); F_FLOAT sumbtf = bt1 + bt2 + bt3; for (int i = 0; i < 4; i++) for (int j = 0; j < 3; j++) fabcd[i][j] += db*sumbtf*dphidr[i][j] + sumbte*dbonddr[1][i][j]; // end-bond/torsion coupling // energy on bond1 (first bond) bt1 = d_ebt_f1_1[type] * cosphi; bt2 = d_ebt_f2_1[type] * cos2phi; bt3 = d_ebt_f3_1[type] * cos3phi; sumbte = bt1 + bt2 + bt3; db = r1 - d_ebt_r0_1[type]; if (eflag) edihedral += db * (bt1+bt2+bt3); // force on bond1 bt1 = d_ebt_f1_1[type] * sinphi; bt2 = 2.0 * d_ebt_f2_1[type] * sin(2.0*phi); bt3 = 3.0 * d_ebt_f3_1[type] * sin(3.0*phi); sumbtf = bt1 + bt2 + bt3; for (int i = 0; i < 4; i++) for (int j = 0; j < 3; j++) fabcd[i][j] -= db*sumbtf*dphidr[i][j] + sumbte*dbonddr[0][i][j]; // end-bond/torsion coupling // energy on bond3 (last bond) bt1 = d_ebt_f1_2[type] * cosphi; bt2 = d_ebt_f2_2[type] * cos2phi; bt3 = d_ebt_f3_2[type] * cos3phi; sumbte = bt1 + bt2 + bt3; db = r3 - d_ebt_r0_2[type]; if (eflag) edihedral += db * (bt1+bt2+bt3); // force on bond3 bt1 = -d_ebt_f1_2[type] * sinphi; bt2 = -2.0 * d_ebt_f2_2[type] * sin(2.0*phi); bt3 = -3.0 * d_ebt_f3_2[type] * sin(3.0*phi); sumbtf = bt1 + bt2 + bt3; for (int i = 0; i < 4; i++) for (int j = 0; j < 3; j++) fabcd[i][j] += db*sumbtf*dphidr[i][j] + sumbte*dbonddr[2][i][j]; // angle/torsion coupling // energy on angle1 F_FLOAT at1 = d_at_f1_1[type] * cosphi; F_FLOAT at2 = d_at_f2_1[type] * cos2phi; F_FLOAT at3 = d_at_f3_1[type] * cos3phi; sumbte = at1 + at2 + at3; F_FLOAT da = acos(costh12) - d_at_theta0_1[type]; if (eflag) edihedral += da * (at1+at2+at3); // force on angle1 bt1 = d_at_f1_1[type] * sinphi; bt2 = 2.0 * d_at_f2_1[type] * sin(2.0*phi); bt3 = 3.0 * d_at_f3_1[type] * sin(3.0*phi); sumbtf = bt1 + bt2 + bt3; for (int i = 0; i < 4; i++) for (int j = 0; j < 3; j++) fabcd[i][j] -= da*sumbtf*dphidr[i][j] + sumbte*dthetadr[0][i][j]; // energy on angle2 at1 = d_at_f1_2[type] * cosphi; at2 = d_at_f2_2[type] * cos2phi; at3 = d_at_f3_2[type] * cos3phi; sumbte = at1 + at2 + at3; da = acos(costh23) - d_at_theta0_2[type]; if (eflag) edihedral += da * (at1+at2+at3); // force on angle2 bt1 = -d_at_f1_2[type] * sinphi; bt2 = -2.0 * d_at_f2_2[type] * sin(2.0*phi); bt3 = -3.0 * d_at_f3_2[type] * sin(3.0*phi); sumbtf = bt1 + bt2 + bt3; for (int i = 0; i < 4; i++) for (int j = 0; j < 3; j++) fabcd[i][j] += da*sumbtf*dphidr[i][j] + sumbte*dthetadr[1][i][j]; // angle/angle/torsion coupling const F_FLOAT da1 = acos(costh12) - d_aat_theta0_1[type]; const F_FLOAT da2 = acos(costh23) - d_aat_theta0_2[type]; if (eflag) edihedral += d_aat_k[type]*da1*da2*cosphi; for (int i = 0; i < 4; i++) for (int j = 0; j < 3; j++) fabcd[i][j] -= d_aat_k[type] * (cosphi * (da2*dthetadr[0][i][j] - da1*dthetadr[1][i][j]) + sinphi * da1*da2*dphidr[i][j]); // bond1/bond3 coupling if (fabs(d_bb13t_k[type]) > SMALL) { const F_FLOAT r1_0 = d_bb13t_r10[type]; const F_FLOAT r3_0 = d_bb13t_r30[type]; const F_FLOAT dr1 = r1 - r1_0; const F_FLOAT dr2 = r3 - r3_0; const F_FLOAT tk1 = -d_bb13t_k[type] * dr1 / r3; const F_FLOAT tk2 = -d_bb13t_k[type] * dr2 / r1; if (eflag) edihedral += d_bb13t_k[type]*dr1*dr2; fabcd[0][0] += tk2 * vb1x; fabcd[0][1] += tk2 * vb1y; fabcd[0][2] += tk2 * vb1z; fabcd[1][0] -= tk2 * vb1x; fabcd[1][1] -= tk2 * vb1y; fabcd[1][2] -= tk2 * vb1z; fabcd[2][0] -= tk1 * vb3x; fabcd[2][1] -= tk1 * vb3y; fabcd[2][2] -= tk1 * vb3z; fabcd[3][0] += tk1 * vb3x; fabcd[3][1] += tk1 * vb3y; fabcd[3][2] += tk1 * vb3z; } F_FLOAT f1[3],f2[3],f3[3],f4[3]; for (int i = 0; i < 3; i++) { f1[i] = fabcd[0][i]; f2[i] = fabcd[1][i]; f3[i] = fabcd[2][i]; f4[i] = fabcd[3][i]; } // apply force to each of 4 atoms if (NEWTON_BOND || i1 < nlocal) { a_f(i1,0) += f1[0]; a_f(i1,1) += f1[1]; a_f(i1,2) += f1[2]; } if (NEWTON_BOND || i2 < nlocal) { a_f(i2,0) += f2[0]; a_f(i2,1) += f2[1]; a_f(i2,2) += f2[2]; } if (NEWTON_BOND || i3 < nlocal) { a_f(i3,0) += f3[0]; a_f(i3,1) += f3[1]; a_f(i3,2) += f3[2]; } if (NEWTON_BOND || i4 < nlocal) { a_f(i4,0) += f4[0]; a_f(i4,1) += f4[1]; a_f(i4,2) += f4[2]; } if (EVFLAG) ev_tally(ev,i1,i2,i3,i4,edihedral,f1,f3,f4, vb1x,vb1y,vb1z,vb2x,vb2y,vb2z,vb3x,vb3y,vb3z); } /* ---------------------------------------------------------------------- */ template template KOKKOS_INLINE_FUNCTION void DihedralClass2Kokkos::operator()(TagDihedralClass2Compute, const int &n) const { EV_FLOAT ev; this->template operator()(TagDihedralClass2Compute(), n, ev); } /* ---------------------------------------------------------------------- */ template void DihedralClass2Kokkos::allocate() { DihedralClass2::allocate(); } /* ---------------------------------------------------------------------- set coeffs for one type ------------------------------------------------------------------------- */ template void DihedralClass2Kokkos::coeff(int narg, char **arg) { DihedralClass2::coeff(narg, arg); int n = atom->ndihedraltypes; k_k1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::k1",n+1); k_k2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::k2",n+1); k_k3 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::k3",n+1); k_phi1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::phi1",n+1); k_phi2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::phi2",n+1); k_phi3 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::phi3",n+1); k_mbt_f1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::mbt_f1",n+1); k_mbt_f2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::mbt_f2",n+1); k_mbt_f3 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::mbt_f3",n+1); k_mbt_r0 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::mbt_r0",n+1); k_ebt_f1_1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::ebt_f1_1",n+1); k_ebt_f2_1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::ebt_f2_1",n+1); k_ebt_f3_1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::ebt_f3_1",n+1); k_ebt_r0_1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::ebt_r0_1",n+1); k_ebt_f1_2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::ebt_f1_2",n+1); k_ebt_f2_2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::ebt_f2_2",n+1); k_ebt_f3_2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::ebt_f3_2",n+1); k_ebt_r0_2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::ebt_r0_2",n+1); k_at_f1_1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::at_f1_1",n+1); k_at_f2_1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::at_f2_1",n+1); k_at_f3_1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::at_f3_1",n+1); k_at_f1_2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::at_f1_2",n+1); k_at_f2_2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::at_f2_2",n+1); k_at_f3_2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::at_f3_2",n+1); k_at_theta0_1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::at_theta0_1",n+1); k_at_theta0_2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::at_theta0_2",n+1); k_aat_k = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::aat_k",n+1); k_aat_theta0_1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::aat_theta0_1",n+1); k_aat_theta0_2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::aat_theta0_2",n+1); k_bb13t_k = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::bb13t_k",n+1); k_bb13t_r10 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::bb13t_r10",n+1); k_bb13t_r30 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::bb13t_r30",n+1); k_setflag_d = typename ArrayTypes::tdual_ffloat_1d("AngleClass2::setflag_d",n+1); k_setflag_mbt = typename ArrayTypes::tdual_ffloat_1d("AngleClass2::setflag_mbt",n+1); k_setflag_ebt = typename ArrayTypes::tdual_ffloat_1d("AngleClass2::setflag_ebt",n+1); k_setflag_at = typename ArrayTypes::tdual_ffloat_1d("AngleClass2::setflag_at",n+1); k_setflag_aat = typename ArrayTypes::tdual_ffloat_1d("AngleClass2::setflag_aat",n+1); k_setflag_bb13t = typename ArrayTypes::tdual_ffloat_1d("AngleClass2::setflag_bb13t",n+1); d_k1 = k_k1.template view(); d_k2 = k_k2.template view(); d_k3 = k_k3.template view(); d_phi1 = k_phi1.template view(); d_phi2 = k_phi2.template view(); d_phi3 = k_phi3.template view(); d_mbt_f1 = k_mbt_f1.template view(); d_mbt_f2 = k_mbt_f2.template view(); d_mbt_f3 = k_mbt_f3.template view(); d_mbt_r0 = k_mbt_r0.template view(); d_ebt_f1_1 = k_ebt_f1_1.template view(); d_ebt_f2_1 = k_ebt_f2_1.template view(); d_ebt_f3_1 = k_ebt_f3_1.template view(); d_ebt_r0_1 = k_ebt_r0_1.template view(); d_ebt_f1_2 = k_ebt_f1_2.template view(); d_ebt_f2_2 = k_ebt_f2_2.template view(); d_ebt_f3_2 = k_ebt_f3_2.template view(); d_ebt_r0_2 = k_ebt_r0_2.template view(); d_at_f1_1 = k_at_f1_1.template view(); d_at_f2_1 = k_at_f2_1.template view(); d_at_f3_1 = k_at_f3_1.template view(); d_at_f1_2 = k_at_f1_2.template view(); d_at_f2_2 = k_at_f2_2.template view(); d_at_f3_2 = k_at_f3_2.template view(); d_at_theta0_1 = k_at_theta0_1.template view(); d_at_theta0_2 = k_at_theta0_2.template view(); d_aat_k = k_aat_k.template view(); d_aat_theta0_1 = k_aat_theta0_1.template view(); d_aat_theta0_2 = k_aat_theta0_2.template view(); d_bb13t_k = k_bb13t_k.template view(); d_bb13t_r10 = k_bb13t_r10.template view(); d_bb13t_r30 = k_bb13t_r30.template view(); d_setflag_d = k_setflag_d.template view(); d_setflag_mbt = k_setflag_mbt.template view(); d_setflag_ebt = k_setflag_ebt.template view(); d_setflag_at = k_setflag_at.template view(); d_setflag_aat = k_setflag_aat.template view(); d_setflag_bb13t = k_setflag_bb13t.template view(); for (int i = 1; i <= n; i++) { k_k1.h_view[i] = k1[i]; k_k2.h_view[i] = k2[i]; k_k3.h_view[i] = k3[i]; k_phi1.h_view[i] = phi1[i]; k_phi2.h_view[i] = phi2[i]; k_phi3.h_view[i] = phi3[i]; k_mbt_f1.h_view[i] = mbt_f1[i]; k_mbt_f2.h_view[i] = mbt_f2[i]; k_mbt_f3.h_view[i] = mbt_f3[i]; k_mbt_r0.h_view[i] = mbt_r0[i]; k_ebt_f1_1.h_view[i] = ebt_f1_1[i]; k_ebt_f2_1.h_view[i] = ebt_f2_1[i]; k_ebt_f3_1.h_view[i] = ebt_f3_1[i]; k_ebt_r0_1.h_view[i] = ebt_r0_1[i]; k_ebt_f1_2.h_view[i] = ebt_f1_2[i]; k_ebt_f2_2.h_view[i] = ebt_f2_2[i]; k_ebt_f3_2.h_view[i] = ebt_f3_2[i]; k_ebt_r0_2.h_view[i] = ebt_r0_2[i]; k_at_f1_1.h_view[i] = at_f1_1[i]; k_at_f2_1.h_view[i] = at_f2_1[i]; k_at_f3_1.h_view[i] = at_f3_1[i]; k_at_f1_2.h_view[i] = at_f1_2[i]; k_at_f2_2.h_view[i] = at_f2_2[i]; k_at_f3_2.h_view[i] = at_f3_2[i]; k_at_theta0_1.h_view[i] = at_theta0_1[i]; k_at_theta0_2.h_view[i] = at_theta0_2[i]; k_aat_k.h_view[i] = aat_k[i]; k_aat_theta0_1.h_view[i] = aat_theta0_1[i]; k_aat_theta0_2.h_view[i] = aat_theta0_2[i]; k_bb13t_k.h_view[i] = bb13t_k[i]; k_bb13t_r10.h_view[i] = bb13t_r10[i]; k_bb13t_r30.h_view[i] = bb13t_r30[i]; k_setflag_d.h_view[i] = setflag_d[i]; k_setflag_mbt.h_view[i] = setflag_mbt[i]; k_setflag_ebt.h_view[i] = setflag_ebt[i]; k_setflag_at.h_view[i] = setflag_at[i]; k_setflag_aat.h_view[i] = setflag_aat[i]; k_setflag_bb13t.h_view[i] = setflag_bb13t[i]; } k_k1.template modify(); k_k2.template modify(); k_k3.template modify(); k_phi1.template modify(); k_phi2.template modify(); k_phi3.template modify(); k_mbt_f1.template modify(); k_mbt_f2.template modify(); k_mbt_f3.template modify(); k_mbt_r0.template modify(); k_ebt_f1_1.template modify(); k_ebt_f2_1.template modify(); k_ebt_f3_1.template modify(); k_ebt_r0_1.template modify(); k_ebt_f1_2.template modify(); k_ebt_f2_2.template modify(); k_ebt_f3_2.template modify(); k_ebt_r0_2.template modify(); k_at_f1_1.template modify(); k_at_f2_1.template modify(); k_at_f3_1.template modify(); k_at_f1_2.template modify(); k_at_f2_2.template modify(); k_at_f3_2.template modify(); k_at_theta0_1.template modify(); k_at_theta0_2.template modify(); k_aat_k.template modify(); k_aat_theta0_1.template modify(); k_aat_theta0_2.template modify(); k_bb13t_k.template modify(); k_bb13t_r10.template modify(); k_bb13t_r30.template modify(); k_setflag_d.template modify(); k_setflag_mbt.template modify(); k_setflag_ebt.template modify(); k_setflag_at.template modify(); k_setflag_aat.template modify(); k_setflag_bb13t.template modify(); } /* ---------------------------------------------------------------------- proc 0 reads coeffs from restart file, bcasts them ------------------------------------------------------------------------- */ template void DihedralClass2Kokkos::read_restart(FILE *fp) { DihedralClass2::read_restart(fp); int n = atom->ndihedraltypes; k_k1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::k1",n+1); k_k2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::k2",n+1); k_k3 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::k3",n+1); k_phi1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::phi1",n+1); k_phi2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::phi2",n+1); k_phi3 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::phi3",n+1); k_mbt_f1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::mbt_f1",n+1); k_mbt_f2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::mbt_f2",n+1); k_mbt_f3 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::mbt_f3",n+1); k_mbt_r0 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::mbt_r0",n+1); k_ebt_f1_1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::ebt_f1_1",n+1); k_ebt_f2_1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::ebt_f2_1",n+1); k_ebt_f3_1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::ebt_f3_1",n+1); k_ebt_r0_1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::ebt_r0_1",n+1); k_ebt_f1_2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::ebt_f1_2",n+1); k_ebt_f2_2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::ebt_f2_2",n+1); k_ebt_f3_2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::ebt_f3_2",n+1); k_ebt_r0_2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::ebt_r0_2",n+1); k_at_f1_1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::at_f1_1",n+1); k_at_f2_1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::at_f2_1",n+1); k_at_f3_1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::at_f3_1",n+1); k_at_f1_2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::at_f1_2",n+1); k_at_f2_2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::at_f2_2",n+1); k_at_f3_2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::at_f3_2",n+1); k_at_theta0_1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::at_theta0_1",n+1); k_at_theta0_2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::at_theta0_2",n+1); k_aat_k = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::aat_k",n+1); k_aat_theta0_1 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::aat_theta0_1",n+1); k_aat_theta0_2 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::aat_theta0_2",n+1); k_bb13t_k = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::bb13t_k",n+1); k_bb13t_r10 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::bb13t_r10",n+1); k_bb13t_r30 = typename ArrayTypes::tdual_ffloat_1d("DihedralClass2::bb13t_r30",n+1); k_setflag_d = typename ArrayTypes::tdual_ffloat_1d("AngleClass2::setflag_d",n+1); k_setflag_mbt = typename ArrayTypes::tdual_ffloat_1d("AngleClass2::setflag_mbt",n+1); k_setflag_ebt = typename ArrayTypes::tdual_ffloat_1d("AngleClass2::setflag_ebt",n+1); k_setflag_at = typename ArrayTypes::tdual_ffloat_1d("AngleClass2::setflag_at",n+1); k_setflag_aat = typename ArrayTypes::tdual_ffloat_1d("AngleClass2::setflag_aat",n+1); k_setflag_bb13t = typename ArrayTypes::tdual_ffloat_1d("AngleClass2::setflag_bb13t",n+1); d_k1 = k_k1.template view(); d_k2 = k_k2.template view(); d_k3 = k_k3.template view(); d_phi1 = k_phi1.template view(); d_phi2 = k_phi2.template view(); d_phi3 = k_phi3.template view(); d_mbt_f1 = k_mbt_f1.template view(); d_mbt_f2 = k_mbt_f2.template view(); d_mbt_f3 = k_mbt_f3.template view(); d_mbt_r0 = k_mbt_r0.template view(); d_ebt_f1_1 = k_ebt_f1_1.template view(); d_ebt_f2_1 = k_ebt_f2_1.template view(); d_ebt_f3_1 = k_ebt_f3_1.template view(); d_ebt_r0_1 = k_ebt_r0_1.template view(); d_ebt_f1_2 = k_ebt_f1_2.template view(); d_ebt_f2_2 = k_ebt_f2_2.template view(); d_ebt_f3_2 = k_ebt_f3_2.template view(); d_ebt_r0_2 = k_ebt_r0_2.template view(); d_at_f1_1 = k_at_f1_1.template view(); d_at_f2_1 = k_at_f2_1.template view(); d_at_f3_1 = k_at_f3_1.template view(); d_at_f1_2 = k_at_f1_2.template view(); d_at_f2_2 = k_at_f2_2.template view(); d_at_f3_2 = k_at_f3_2.template view(); d_at_theta0_1 = k_at_theta0_1.template view(); d_at_theta0_2 = k_at_theta0_2.template view(); d_aat_k = k_aat_k.template view(); d_aat_theta0_1 = k_aat_theta0_1.template view(); d_aat_theta0_2 = k_aat_theta0_2.template view(); d_bb13t_k = k_bb13t_k.template view(); d_bb13t_r10 = k_bb13t_r10.template view(); d_bb13t_r30 = k_bb13t_r30.template view(); d_setflag_d = k_setflag_d.template view(); d_setflag_mbt = k_setflag_mbt.template view(); d_setflag_ebt = k_setflag_ebt.template view(); d_setflag_at = k_setflag_at.template view(); d_setflag_aat = k_setflag_aat.template view(); d_setflag_bb13t = k_setflag_bb13t.template view(); for (int i = 1; i <= n; i++) { k_k1.h_view[i] = k1[i]; k_k2.h_view[i] = k2[i]; k_k3.h_view[i] = k3[i]; k_phi1.h_view[i] = phi1[i]; k_phi2.h_view[i] = phi2[i]; k_phi3.h_view[i] = phi3[i]; k_mbt_f1.h_view[i] = mbt_f1[i]; k_mbt_f2.h_view[i] = mbt_f2[i]; k_mbt_f3.h_view[i] = mbt_f3[i]; k_mbt_r0.h_view[i] = mbt_r0[i]; k_ebt_f1_1.h_view[i] = ebt_f1_1[i]; k_ebt_f2_1.h_view[i] = ebt_f2_1[i]; k_ebt_f3_1.h_view[i] = ebt_f3_1[i]; k_ebt_r0_1.h_view[i] = ebt_r0_1[i]; k_ebt_f1_2.h_view[i] = ebt_f1_2[i]; k_ebt_f2_2.h_view[i] = ebt_f2_2[i]; k_ebt_f3_2.h_view[i] = ebt_f3_2[i]; k_ebt_r0_2.h_view[i] = ebt_r0_2[i]; k_at_f1_1.h_view[i] = at_f1_1[i]; k_at_f2_1.h_view[i] = at_f2_1[i]; k_at_f3_1.h_view[i] = at_f3_1[i]; k_at_f1_2.h_view[i] = at_f1_2[i]; k_at_f2_2.h_view[i] = at_f2_2[i]; k_at_f3_2.h_view[i] = at_f3_2[i]; k_at_theta0_1.h_view[i] = at_theta0_1[i]; k_at_theta0_2.h_view[i] = at_theta0_2[i]; k_aat_k.h_view[i] = aat_k[i]; k_aat_theta0_1.h_view[i] = aat_theta0_1[i]; k_aat_theta0_2.h_view[i] = aat_theta0_2[i]; k_bb13t_k.h_view[i] = bb13t_k[i]; k_bb13t_r10.h_view[i] = bb13t_r10[i]; k_bb13t_r30.h_view[i] = bb13t_r30[i]; k_setflag_d.h_view[i] = setflag_d[i]; k_setflag_mbt.h_view[i] = setflag_mbt[i]; k_setflag_ebt.h_view[i] = setflag_ebt[i]; k_setflag_at.h_view[i] = setflag_at[i]; k_setflag_aat.h_view[i] = setflag_aat[i]; k_setflag_bb13t.h_view[i] = setflag_bb13t[i]; } k_k1.template modify(); k_k2.template modify(); k_k3.template modify(); k_phi1.template modify(); k_phi2.template modify(); k_phi3.template modify(); k_mbt_f1.template modify(); k_mbt_f2.template modify(); k_mbt_f3.template modify(); k_mbt_r0.template modify(); k_ebt_f1_1.template modify(); k_ebt_f2_1.template modify(); k_ebt_f3_1.template modify(); k_ebt_r0_1.template modify(); k_ebt_f1_2.template modify(); k_ebt_f2_2.template modify(); k_ebt_f3_2.template modify(); k_ebt_r0_2.template modify(); k_at_f1_1.template modify(); k_at_f2_1.template modify(); k_at_f3_1.template modify(); k_at_f1_2.template modify(); k_at_f2_2.template modify(); k_at_f3_2.template modify(); k_at_theta0_1.template modify(); k_at_theta0_2.template modify(); k_aat_k.template modify(); k_aat_theta0_1.template modify(); k_aat_theta0_2.template modify(); k_bb13t_k.template modify(); k_bb13t_r10.template modify(); k_bb13t_r30.template modify(); k_setflag_d.template modify(); k_setflag_mbt.template modify(); k_setflag_ebt.template modify(); k_setflag_at.template modify(); k_setflag_aat.template modify(); k_setflag_bb13t.template modify(); } /* ---------------------------------------------------------------------- tally energy and virial into global and per-atom accumulators virial = r1F1 + r2F2 + r3F3 + r4F4 = (r1-r2) F1 + (r3-r2) F3 + (r4-r2) F4 = (r1-r2) F1 + (r3-r2) F3 + (r4-r3 + r3-r2) F4 = vb1*f1 + vb2*f3 + (vb3+vb2)*f4 ------------------------------------------------------------------------- */ template //template KOKKOS_INLINE_FUNCTION void DihedralClass2Kokkos::ev_tally(EV_FLOAT &ev, const int i1, const int i2, const int i3, const int i4, F_FLOAT &edihedral, F_FLOAT *f1, F_FLOAT *f3, F_FLOAT *f4, const F_FLOAT &vb1x, const F_FLOAT &vb1y, const F_FLOAT &vb1z, const F_FLOAT &vb2x, const F_FLOAT &vb2y, const F_FLOAT &vb2z, const F_FLOAT &vb3x, const F_FLOAT &vb3y, const F_FLOAT &vb3z) const { E_FLOAT edihedralquarter; F_FLOAT v[6]; // The eatom and vatom arrays are atomic Kokkos::View > v_eatom = k_eatom.view(); Kokkos::View > v_vatom = k_vatom.view(); if (eflag_either) { if (eflag_global) { if (newton_bond) ev.evdwl += edihedral; else { edihedralquarter = 0.25*edihedral; if (i1 < nlocal) ev.evdwl += edihedralquarter; if (i2 < nlocal) ev.evdwl += edihedralquarter; if (i3 < nlocal) ev.evdwl += edihedralquarter; if (i4 < nlocal) ev.evdwl += edihedralquarter; } } if (eflag_atom) { edihedralquarter = 0.25*edihedral; if (newton_bond || i1 < nlocal) v_eatom[i1] += edihedralquarter; if (newton_bond || i2 < nlocal) v_eatom[i2] += edihedralquarter; if (newton_bond || i3 < nlocal) v_eatom[i3] += edihedralquarter; if (newton_bond || i4 < nlocal) v_eatom[i4] += edihedralquarter; } } if (vflag_either) { v[0] = vb1x*f1[0] + vb2x*f3[0] + (vb3x+vb2x)*f4[0]; v[1] = vb1y*f1[1] + vb2y*f3[1] + (vb3y+vb2y)*f4[1]; v[2] = vb1z*f1[2] + vb2z*f3[2] + (vb3z+vb2z)*f4[2]; v[3] = vb1x*f1[1] + vb2x*f3[1] + (vb3x+vb2x)*f4[1]; v[4] = vb1x*f1[2] + vb2x*f3[2] + (vb3x+vb2x)*f4[2]; v[5] = vb1y*f1[2] + vb2y*f3[2] + (vb3y+vb2y)*f4[2]; if (vflag_global) { if (newton_bond) { ev.v[0] += v[0]; ev.v[1] += v[1]; ev.v[2] += v[2]; ev.v[3] += v[3]; ev.v[4] += v[4]; ev.v[5] += v[5]; } else { if (i1 < nlocal) { ev.v[0] += 0.25*v[0]; ev.v[1] += 0.25*v[1]; ev.v[2] += 0.25*v[2]; ev.v[3] += 0.25*v[3]; ev.v[4] += 0.25*v[4]; ev.v[5] += 0.25*v[5]; } if (i2 < nlocal) { ev.v[0] += 0.25*v[0]; ev.v[1] += 0.25*v[1]; ev.v[2] += 0.25*v[2]; ev.v[3] += 0.25*v[3]; ev.v[4] += 0.25*v[4]; ev.v[5] += 0.25*v[5]; } if (i3 < nlocal) { ev.v[0] += 0.25*v[0]; ev.v[1] += 0.25*v[1]; ev.v[2] += 0.25*v[2]; ev.v[3] += 0.25*v[3]; ev.v[4] += 0.25*v[4]; ev.v[5] += 0.25*v[5]; } if (i4 < nlocal) { ev.v[0] += 0.25*v[0]; ev.v[1] += 0.25*v[1]; ev.v[2] += 0.25*v[2]; ev.v[3] += 0.25*v[3]; ev.v[4] += 0.25*v[4]; ev.v[5] += 0.25*v[5]; } } } if (vflag_atom) { if (newton_bond || i1 < nlocal) { v_vatom(i1,0) += 0.25*v[0]; v_vatom(i1,1) += 0.25*v[1]; v_vatom(i1,2) += 0.25*v[2]; v_vatom(i1,3) += 0.25*v[3]; v_vatom(i1,4) += 0.25*v[4]; v_vatom(i1,5) += 0.25*v[5]; } if (newton_bond || i2 < nlocal) { v_vatom(i2,0) += 0.25*v[0]; v_vatom(i2,1) += 0.25*v[1]; v_vatom(i2,2) += 0.25*v[2]; v_vatom(i2,3) += 0.25*v[3]; v_vatom(i2,4) += 0.25*v[4]; v_vatom(i2,5) += 0.25*v[5]; } if (newton_bond || i3 < nlocal) { v_vatom(i3,0) += 0.25*v[0]; v_vatom(i3,1) += 0.25*v[1]; v_vatom(i3,2) += 0.25*v[2]; v_vatom(i3,3) += 0.25*v[3]; v_vatom(i3,4) += 0.25*v[4]; v_vatom(i3,5) += 0.25*v[5]; } if (newton_bond || i4 < nlocal) { v_vatom(i4,0) += 0.25*v[0]; v_vatom(i4,1) += 0.25*v[1]; v_vatom(i4,2) += 0.25*v[2]; v_vatom(i4,3) += 0.25*v[3]; v_vatom(i4,4) += 0.25*v[4]; v_vatom(i4,5) += 0.25*v[5]; } } } } /* ---------------------------------------------------------------------- */ namespace LAMMPS_NS { template class DihedralClass2Kokkos; #ifdef KOKKOS_HAVE_CUDA template class DihedralClass2Kokkos; #endif }