LAMMPS (6 Oct 2016) # bulk Cu lattice variable x index 1 variable y index 1 variable z index 1 variable xx equal 20*$x variable xx equal 20*2 variable yy equal 20*$y variable yy equal 20*2 variable zz equal 20*$z variable zz equal 20*1 units metal atom_style atomic lattice fcc 3.615 Lattice spacing in x,y,z = 3.615 3.615 3.615 region box block 0 ${xx} 0 ${yy} 0 ${zz} region box block 0 40 0 ${yy} 0 ${zz} region box block 0 40 0 40 0 ${zz} region box block 0 40 0 40 0 20 create_box 1 box Created orthogonal box = (0 0 0) to (144.6 144.6 72.3) 2 by 2 by 1 MPI processor grid create_atoms 1 box Created 128000 atoms pair_style eam pair_coeff 1 1 Cu_u3.eam Reading potential file Cu_u3.eam with DATE: 2007-06-11 velocity all create 1600.0 376847 loop geom neighbor 1.0 bin neigh_modify every 1 delay 5 check yes fix 1 all nve timestep 0.005 thermo 50 run 100 Neighbor list info ... 1 neighbor list requests update every 1 steps, delay 5 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.95 ghost atom cutoff = 5.95 binsize = 2.975 -> bins = 49 49 25 Memory usage per processor = 11.1402 Mbytes Step Temp E_pair E_mol TotEng Press 0 1600 -453120 0 -426647.73 18704.012 50 779.50001 -439457.02 0 -426560.06 52355.276 100 797.97828 -439764.76 0 -426562.07 51474.74 Loop time of 6.60121 on 4 procs for 100 steps with 128000 atoms Performance: 6.544 ns/day, 3.667 hours/ns, 15.149 timesteps/s 99.9% CPU use with 4 MPI tasks x no OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 5.6676 | 5.7011 | 5.7469 | 1.3 | 86.36 Neigh | 0.66423 | 0.67119 | 0.68082 | 0.7 | 10.17 Comm | 0.079367 | 0.13668 | 0.1791 | 10.5 | 2.07 Output | 0.00026989 | 0.00028622 | 0.00031209 | 0.1 | 0.00 Modify | 0.060046 | 0.062203 | 0.065009 | 0.9 | 0.94 Other | | 0.02974 | | | 0.45 Nlocal: 32000 ave 32092 max 31914 min Histogram: 1 0 0 1 0 1 0 0 0 1 Nghost: 19910 ave 19997 max 19818 min Histogram: 1 0 0 0 1 0 1 0 0 1 Neighs: 1.20728e+06 ave 1.21142e+06 max 1.2036e+06 min Histogram: 1 0 0 1 1 0 0 0 0 1 Total # of neighbors = 4829126 Ave neighs/atom = 37.7275 Neighbor list builds = 14 Dangerous builds = 0 Total wall time: 0:00:06