/* ---------------------------------------------------------------------- LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator https://www.lammps.org/, Sandia National Laboratories LAMMPS Development team: developers@lammps.org Copyright (2003) Sandia Corporation. Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains certain rights in this software. This software is distributed under the GNU General Public License. See the README file in the top-level LAMMPS directory. ------------------------------------------------------------------------- */ // unit tests for angle styles intended for molecular systems #include "error_stats.h" #include "test_config.h" #include "test_config_reader.h" #include "test_main.h" #include "yaml_reader.h" #include "yaml_writer.h" #include "gmock/gmock.h" #include "gtest/gtest.h" #include "angle.h" #include "atom.h" #include "compute.h" #include "exceptions.h" #include "fix.h" #include "fmt/format.h" #include "force.h" #include "info.h" #include "input.h" #include "lammps.h" #include "modify.h" #include "platform.h" #include "universe.h" #include #include #include #include #include #include #include #include #include using ::testing::HasSubstr; using ::testing::StartsWith; using namespace LAMMPS_NS; void cleanup_lammps(LAMMPS *lmp, const TestConfig &cfg) { platform::unlink(cfg.basename + ".restart"); platform::unlink(cfg.basename + ".data"); platform::unlink(cfg.basename + "-coeffs.in"); delete lmp; } LAMMPS *init_lammps(LAMMPS::argv &args, const TestConfig &cfg, const bool newton = true) { LAMMPS *lmp; lmp = new LAMMPS(args, MPI_COMM_WORLD); // check if prerequisite styles are available Info *info = new Info(lmp); int nfail = 0; for (auto &prerequisite : cfg.prerequisites) { std::string style = prerequisite.second; // this is a test for angle styles, so if the suffixed // version is not available, there is no reason to test. if (prerequisite.first == "angle") { if (lmp->suffix_enable) { style += "/"; style += lmp->suffix; } } if (!info->has_style(prerequisite.first, style)) ++nfail; } delete info; if (nfail > 0) { cleanup_lammps(lmp, cfg); return nullptr; } // utility lambdas to improve readability auto command = [&](const std::string &line) { try { lmp->input->one(line); } catch (LAMMPSAbortException &ae) { fprintf(stderr, "LAMMPS Error: %s\n", ae.what()); exit(2); } catch (LAMMPSException &e) { fprintf(stderr, "LAMMPS Error: %s\n", e.what()); exit(3); } catch (fmt::format_error &fe) { fprintf(stderr, "fmt::format_error: %s\n", fe.what()); exit(4); } catch (std::exception &e) { fprintf(stderr, "General exception: %s\n", e.what()); exit(5); } }; auto parse_input_script = [&](const std::string &filename) { lmp->input->file(filename.c_str()); }; if (newton) { command("variable newton_bond index on"); } else { command("variable newton_bond index off"); } command("variable input_dir index " + INPUT_FOLDER); for (auto &pre_command : cfg.pre_commands) { command(pre_command); } std::string input_file = platform::path_join(INPUT_FOLDER, cfg.input_file); parse_input_script(input_file); command("angle_style " + cfg.angle_style); for (auto &angle_coeff : cfg.angle_coeff) { command("angle_coeff " + angle_coeff); } for (auto &post_command : cfg.post_commands) { command(post_command); } command("run 0 post no"); command("write_restart " + cfg.basename + ".restart"); command("write_data " + cfg.basename + ".data"); command("write_coeff " + cfg.basename + "-coeffs.in"); return lmp; } void run_lammps(LAMMPS *lmp) { // utility lambda to improve readability auto command = [&](const std::string &line) { lmp->input->one(line); }; command("fix 1 all nve"); command("compute pe all pe/atom angle"); command("compute sum all reduce sum c_pe"); command("thermo_style custom step temp pe press c_sum"); command("thermo 2"); command("run 4 post no"); } void restart_lammps(LAMMPS *lmp, const TestConfig &cfg) { // utility lambda to improve readability auto command = [&](const std::string &line) { lmp->input->one(line); }; command("clear"); command("read_restart " + cfg.basename + ".restart"); if (!lmp->force->angle) { command("angle_style " + cfg.angle_style); } if ((cfg.angle_style.substr(0, 6) == "hybrid") || !lmp->force->angle->writedata) { for (auto &angle_coeff : cfg.angle_coeff) { command("angle_coeff " + angle_coeff); } } for (auto &post_command : cfg.post_commands) { command(post_command); } command("run 0 post no"); } void data_lammps(LAMMPS *lmp, const TestConfig &cfg) { // utility lambdas to improve readability auto command = [&](const std::string &line) { lmp->input->one(line); }; auto parse_input_script = [&](const std::string &filename) { lmp->input->file(filename.c_str()); }; command("clear"); command("variable angle_style delete"); command("variable data_file delete"); command("variable newton_bond delete"); command("variable newton_bond index on"); for (auto &pre_command : cfg.pre_commands) { command(pre_command); } command("variable angle_style index '" + cfg.angle_style + "'"); command("variable data_file index " + cfg.basename + ".data"); std::string input_file = platform::path_join(INPUT_FOLDER, cfg.input_file); parse_input_script(input_file); for (auto &angle_coeff : cfg.angle_coeff) { command("angle_coeff " + angle_coeff); } for (auto &post_command : cfg.post_commands) { command(post_command); } command("run 0 post no"); } // re-generate yaml file with current settings. void generate_yaml_file(const char *outfile, const TestConfig &config) { // initialize system geometry LAMMPS::argv args = {"AngleStyle", "-log", "none", "-echo", "screen", "-nocite"}; LAMMPS *lmp = init_lammps(args, config); if (!lmp) { std::cerr << "One or more prerequisite styles are not available " "in this LAMMPS configuration:\n"; for (auto &prerequisite : config.prerequisites) { std::cerr << prerequisite.first << "_style " << prerequisite.second << "\n"; } return; } const int natoms = lmp->atom->natoms; std::string block; YamlWriter writer(outfile); // write yaml header write_yaml_header(&writer, &test_config, lmp->version); // angle_style writer.emit("angle_style", config.angle_style); // angle_coeff block.clear(); for (auto &angle_coeff : config.angle_coeff) { block += angle_coeff + "\n"; } writer.emit_block("angle_coeff", block); // equilibrium angle block = fmt::format("{}", lmp->atom->nangletypes); for (int i = 0; i < lmp->atom->nangletypes; ++i) block += fmt::format(" {}", lmp->force->angle->equilibrium_angle(i + 1)); writer.emit("equilibrium", block); // extract block.clear(); for (auto data : config.extract) block += fmt::format("{} {}\n", data.first, data.second); writer.emit_block("extract", block); // natoms writer.emit("natoms", natoms); // init_energy writer.emit("init_energy", lmp->force->angle->energy); // init_stress auto stress = lmp->force->angle->virial; block = fmt::format("{:23.16e} {:23.16e} {:23.16e} {:23.16e} {:23.16e} {:23.16e}", stress[0], stress[1], stress[2], stress[3], stress[4], stress[5]); writer.emit_block("init_stress", block); // init_forces block.clear(); auto f = lmp->atom->f; for (int i = 1; i <= natoms; ++i) { const int j = lmp->atom->map(i); block += fmt::format("{:3} {:23.16e} {:23.16e} {:23.16e}\n", i, f[j][0], f[j][1], f[j][2]); } writer.emit_block("init_forces", block); // do a few steps of MD run_lammps(lmp); // run_energy writer.emit("run_energy", lmp->force->angle->energy); // run_stress stress = lmp->force->angle->virial; block = fmt::format("{:23.16e} {:23.16e} {:23.16e} {:23.16e} {:23.16e} {:23.16e}", stress[0], stress[1], stress[2], stress[3], stress[4], stress[5]); writer.emit_block("run_stress", block); block.clear(); f = lmp->atom->f; for (int i = 1; i <= natoms; ++i) { const int j = lmp->atom->map(i); block += fmt::format("{:3} {:23.16e} {:23.16e} {:23.16e}\n", i, f[j][0], f[j][1], f[j][2]); } writer.emit_block("run_forces", block); cleanup_lammps(lmp, config); } TEST(AngleStyle, plain) { if (test_config.skip_tests.count(test_info_->name())) GTEST_SKIP(); LAMMPS::argv args = {"AngleStyle", "-log", "none", "-echo", "screen", "-nocite"}; ::testing::internal::CaptureStdout(); LAMMPS *lmp = init_lammps(args, test_config, true); std::string output = ::testing::internal::GetCapturedStdout(); if (verbose) std::cout << output; if (!lmp) { std::cerr << "One or more prerequisite styles are not available " "in this LAMMPS configuration:\n"; for (auto &prerequisite : test_config.prerequisites) { std::cerr << prerequisite.first << "_style " << prerequisite.second << "\n"; } GTEST_SKIP(); } EXPECT_THAT(output, StartsWith("LAMMPS (")); EXPECT_THAT(output, HasSubstr("Loop time")); // abort if running in parallel and not all atoms are local const int nlocal = lmp->atom->nlocal; ASSERT_EQ(lmp->atom->natoms, nlocal); double epsilon = test_config.epsilon; ErrorStats stats; auto angle = lmp->force->angle; EXPECT_FORCES("init_forces (newton on)", lmp->atom, test_config.init_forces, epsilon); EXPECT_STRESS("init_stress (newton on)", angle->virial, test_config.init_stress, epsilon); stats.reset(); EXPECT_FP_LE_WITH_EPS(angle->energy, test_config.init_energy, epsilon); if (print_stats) std::cerr << "init_energy stats, newton on: " << stats << std::endl; if (!verbose) ::testing::internal::CaptureStdout(); run_lammps(lmp); if (!verbose) ::testing::internal::GetCapturedStdout(); EXPECT_FORCES("run_forces (newton on)", lmp->atom, test_config.run_forces, 10 * epsilon); EXPECT_STRESS("run_stress (newton on)", angle->virial, test_config.run_stress, epsilon); stats.reset(); int id = lmp->modify->find_compute("sum"); double energy = lmp->modify->compute[id]->compute_scalar(); EXPECT_FP_LE_WITH_EPS(angle->energy, test_config.run_energy, epsilon); EXPECT_FP_LE_WITH_EPS(angle->energy, energy, epsilon); if (print_stats) std::cerr << "run_energy stats, newton on: " << stats << std::endl; if (!verbose) ::testing::internal::CaptureStdout(); cleanup_lammps(lmp, test_config); lmp = init_lammps(args, test_config, false); if (!verbose) ::testing::internal::GetCapturedStdout(); // skip over these tests if newton bond is forced to be on if (lmp->force->newton_bond == 0) { angle = lmp->force->angle; EXPECT_FORCES("init_forces (newton off)", lmp->atom, test_config.init_forces, epsilon); EXPECT_STRESS("init_stress (newton off)", angle->virial, test_config.init_stress, 2 * epsilon); stats.reset(); EXPECT_FP_LE_WITH_EPS(angle->energy, test_config.init_energy, epsilon); if (print_stats) std::cerr << "init_energy stats, newton off:" << stats << std::endl; if (!verbose) ::testing::internal::CaptureStdout(); run_lammps(lmp); if (!verbose) ::testing::internal::GetCapturedStdout(); EXPECT_FORCES("run_forces (newton off)", lmp->atom, test_config.run_forces, 10 * epsilon); EXPECT_STRESS("run_stress (newton off)", angle->virial, test_config.run_stress, epsilon); stats.reset(); id = lmp->modify->find_compute("sum"); energy = lmp->modify->compute[id]->compute_scalar(); EXPECT_FP_LE_WITH_EPS(angle->energy, test_config.run_energy, epsilon); EXPECT_FP_LE_WITH_EPS(angle->energy, energy, epsilon); if (print_stats) std::cerr << "run_energy stats, newton off:" << stats << std::endl; } if (!verbose) ::testing::internal::CaptureStdout(); restart_lammps(lmp, test_config); if (!verbose) ::testing::internal::GetCapturedStdout(); angle = lmp->force->angle; EXPECT_FORCES("restart_forces", lmp->atom, test_config.init_forces, epsilon); EXPECT_STRESS("restart_stress", angle->virial, test_config.init_stress, epsilon); stats.reset(); EXPECT_FP_LE_WITH_EPS(angle->energy, test_config.init_energy, epsilon); if (print_stats) std::cerr << "restart_energy stats:" << stats << std::endl; if (!verbose) ::testing::internal::CaptureStdout(); data_lammps(lmp, test_config); if (!verbose) ::testing::internal::GetCapturedStdout(); angle = lmp->force->angle; EXPECT_FORCES("data_forces", lmp->atom, test_config.init_forces, epsilon); EXPECT_STRESS("data_stress", angle->virial, test_config.init_stress, epsilon); stats.reset(); EXPECT_FP_LE_WITH_EPS(angle->energy, test_config.init_energy, epsilon); if (print_stats) std::cerr << "data_energy stats:" << stats << std::endl; if (!verbose) ::testing::internal::CaptureStdout(); cleanup_lammps(lmp, test_config); if (!verbose) ::testing::internal::GetCapturedStdout(); }; TEST(AngleStyle, omp) { if (!LAMMPS::is_installed_pkg("OPENMP")) GTEST_SKIP(); if (test_config.skip_tests.count(test_info_->name())) GTEST_SKIP(); LAMMPS::argv args = {"AngleStyle", "-log", "none", "-echo", "screen", "-nocite", "-pk", "omp", "4", "-sf", "omp"}; ::testing::internal::CaptureStdout(); LAMMPS *lmp = init_lammps(args, test_config, true); std::string output = ::testing::internal::GetCapturedStdout(); if (verbose) std::cout << output; if (!lmp) { std::cerr << "One or more prerequisite styles with /omp suffix\n" "are not available in this LAMMPS configuration:\n"; for (auto &prerequisite : test_config.prerequisites) { std::cerr << prerequisite.first << "_style " << prerequisite.second << "\n"; } GTEST_SKIP(); } EXPECT_THAT(output, StartsWith("LAMMPS (")); EXPECT_THAT(output, HasSubstr("Loop time")); // abort if running in parallel and not all atoms are local const int nlocal = lmp->atom->nlocal; ASSERT_EQ(lmp->atom->natoms, nlocal); // relax error a bit for OPENMP package double epsilon = 5.0 * test_config.epsilon; ErrorStats stats; auto angle = lmp->force->angle; EXPECT_FORCES("init_forces (newton on)", lmp->atom, test_config.init_forces, epsilon); EXPECT_STRESS("init_stress (newton on)", angle->virial, test_config.init_stress, 10 * epsilon); stats.reset(); EXPECT_FP_LE_WITH_EPS(angle->energy, test_config.init_energy, epsilon); if (print_stats) std::cerr << "init_energy stats, newton on: " << stats << std::endl; if (!verbose) ::testing::internal::CaptureStdout(); run_lammps(lmp); if (!verbose) ::testing::internal::GetCapturedStdout(); EXPECT_FORCES("run_forces (newton on)", lmp->atom, test_config.run_forces, 10 * epsilon); EXPECT_STRESS("run_stress (newton on)", angle->virial, test_config.run_stress, 10 * epsilon); stats.reset(); int id = lmp->modify->find_compute("sum"); double energy = lmp->modify->compute[id]->compute_scalar(); EXPECT_FP_LE_WITH_EPS(angle->energy, test_config.run_energy, epsilon); // TODO: this is currently broken for OPENMP with angle style hybrid // needs to be fixed in the main code somewhere. Not sure where, though. if (test_config.angle_style.substr(0, 6) != "hybrid") EXPECT_FP_LE_WITH_EPS(angle->energy, energy, epsilon); if (print_stats) std::cerr << "run_energy stats, newton on: " << stats << std::endl; if (!verbose) ::testing::internal::CaptureStdout(); cleanup_lammps(lmp, test_config); lmp = init_lammps(args, test_config, false); if (!verbose) ::testing::internal::GetCapturedStdout(); // skip over these tests if newton bond is forced to be on if (lmp->force->newton_bond == 0) { angle = lmp->force->angle; EXPECT_FORCES("init_forces (newton off)", lmp->atom, test_config.init_forces, epsilon); EXPECT_STRESS("init_stress (newton off)", angle->virial, test_config.init_stress, 10 * epsilon); stats.reset(); EXPECT_FP_LE_WITH_EPS(angle->energy, test_config.init_energy, epsilon); if (print_stats) std::cerr << "init_energy stats, newton off:" << stats << std::endl; if (!verbose) ::testing::internal::CaptureStdout(); run_lammps(lmp); if (!verbose) ::testing::internal::GetCapturedStdout(); EXPECT_FORCES("run_forces (newton off)", lmp->atom, test_config.run_forces, 10 * epsilon); EXPECT_STRESS("run_stress (newton off)", angle->virial, test_config.run_stress, 10 * epsilon); stats.reset(); id = lmp->modify->find_compute("sum"); energy = lmp->modify->compute[id]->compute_scalar(); EXPECT_FP_LE_WITH_EPS(angle->energy, test_config.run_energy, epsilon); // TODO: this is currently broken for OPENMP with angle style hybrid // needs to be fixed in the main code somewhere. Not sure where, though. if (test_config.angle_style.substr(0, 6) != "hybrid") EXPECT_FP_LE_WITH_EPS(angle->energy, energy, epsilon); if (print_stats) std::cerr << "run_energy stats, newton off:" << stats << std::endl; } if (!verbose) ::testing::internal::CaptureStdout(); cleanup_lammps(lmp, test_config); if (!verbose) ::testing::internal::GetCapturedStdout(); }; TEST(AngleStyle, numdiff) { if (!LAMMPS::is_installed_pkg("EXTRA-FIX")) GTEST_SKIP(); if (test_config.skip_tests.count(test_info_->name())) GTEST_SKIP(); LAMMPS::argv args = {"AngleStyle", "-log", "none", "-echo", "screen", "-nocite"}; ::testing::internal::CaptureStdout(); LAMMPS *lmp = init_lammps(args, test_config, true); std::string output = ::testing::internal::GetCapturedStdout(); if (verbose) std::cout << output; if (!lmp) { std::cerr << "One or more prerequisite styles are not available " "in this LAMMPS configuration:\n"; for (auto &prerequisite : test_config.prerequisites) { std::cerr << prerequisite.first << "_style " << prerequisite.second << "\n"; } GTEST_SKIP(); } EXPECT_THAT(output, StartsWith("LAMMPS (")); EXPECT_THAT(output, HasSubstr("Loop time")); // abort if running in parallel and not all atoms are local const int nlocal = lmp->atom->nlocal; ASSERT_EQ(lmp->atom->natoms, nlocal); if (!verbose) ::testing::internal::CaptureStdout(); lmp->input->one("fix diff all numdiff 2 6.05504e-6"); lmp->input->one("run 2 post no"); if (!verbose) ::testing::internal::GetCapturedStdout(); Fix *ifix = lmp->modify->get_fix_by_id("diff"); if (ifix) { double epsilon = test_config.epsilon * 5.0e8; ErrorStats stats; double **f1 = lmp->atom->f; double **f2 = ifix->array_atom; SCOPED_TRACE("EXPECT FORCES: numdiff"); for (int i = 0; i < nlocal; ++i) { EXPECT_FP_LE_WITH_EPS(f1[i][0], f2[i][0], epsilon); EXPECT_FP_LE_WITH_EPS(f1[i][1], f2[i][1], epsilon); EXPECT_FP_LE_WITH_EPS(f1[i][2], f2[i][2], epsilon); } if (print_stats) std::cerr << "numdiff stats: " << stats << " epsilon: " << epsilon << std::endl; } if (!verbose) ::testing::internal::CaptureStdout(); cleanup_lammps(lmp, test_config); if (!verbose) ::testing::internal::GetCapturedStdout(); } TEST(AngleStyle, single) { if (test_config.skip_tests.count(test_info_->name())) GTEST_SKIP(); LAMMPS::argv args = {"AngleStyle", "-log", "none", "-echo", "screen", "-nocite"}; // create a LAMMPS instance with standard settings to detect the number of atom types if (!verbose) ::testing::internal::CaptureStdout(); LAMMPS *lmp = init_lammps(args, test_config); if (!verbose) ::testing::internal::GetCapturedStdout(); if (!lmp) { std::cerr << "One or more prerequisite styles are not available " "in this LAMMPS configuration:\n"; for (auto &prerequisite : test_config.prerequisites) { std::cerr << prerequisite.first << "_style " << prerequisite.second << "\n"; } GTEST_SKIP(); } // gather some information and skip if unsupported int nangletypes = lmp->atom->nangletypes; int molecular = lmp->atom->molecular; if (molecular != Atom::MOLECULAR) { std::cerr << "Only simple molecular atom styles are supported\n"; if (!verbose) ::testing::internal::CaptureStdout(); cleanup_lammps(lmp, test_config); if (!verbose) ::testing::internal::GetCapturedStdout(); GTEST_SKIP(); } // utility lambda to improve readability auto command = [&](const std::string &line) { lmp->input->one(line); }; // now start over if (!verbose) ::testing::internal::CaptureStdout(); command("clear"); command("variable newton_bond delete"); command("variable newton_bond index on"); command("variable input_dir index " + INPUT_FOLDER); for (auto &pre_command : test_config.pre_commands) { command(pre_command); } command("atom_style molecular"); command("units ${units}"); command("boundary p p p"); command("newton ${newton_pair} ${newton_bond}"); command("special_bonds lj/coul " "${bond_factor} ${angle_factor} ${dihedral_factor}"); command("atom_modify map array"); command("region box block -10.0 10.0 -10.0 10.0 -10.0 10.0 units box"); command(fmt::format("create_box 1 box angle/types {} " "extra/angle/per/atom 2 extra/special/per/atom 2", nangletypes)); command("pair_style zero 8.0"); command("pair_coeff * *"); command("angle_style " + test_config.angle_style); Angle *angle = lmp->force->angle; for (auto &angle_coeff : test_config.angle_coeff) { command("angle_coeff " + angle_coeff); } // create (only) three atoms and one angle command("mass * 1.0"); command("create_atoms 1 single 5.0 -0.75 0.4 units box"); command("create_atoms 1 single 5.5 0.25 -0.1 units box"); command("create_atoms 1 single 5.0 0.75 0.4 units box"); command("create_bonds single/angle 1 1 2 3"); for (auto &post_command : test_config.post_commands) { command(post_command); } command("run 0 post no"); if (!verbose) ::testing::internal::GetCapturedStdout(); int idx1 = lmp->atom->map(1); int idx2 = lmp->atom->map(2); int idx3 = lmp->atom->map(3); double epsilon = test_config.epsilon; double eangle[4], esingle[4]; eangle[0] = angle->energy; esingle[0] = angle->single(1, idx1, idx2, idx3); if (!verbose) ::testing::internal::CaptureStdout(); command("displace_atoms all random 0.5 0.5 0.5 23456"); command("run 0 post no"); if (!verbose) ::testing::internal::GetCapturedStdout(); idx1 = lmp->atom->map(1); idx2 = lmp->atom->map(2); idx3 = lmp->atom->map(3); eangle[1] = angle->energy; esingle[1] = angle->single(1, idx1, idx2, idx3); if (!verbose) ::testing::internal::CaptureStdout(); command("displace_atoms all random 0.5 0.5 0.5 456963"); command("run 0 post no"); if (!verbose) ::testing::internal::GetCapturedStdout(); idx1 = lmp->atom->map(1); idx2 = lmp->atom->map(2); idx3 = lmp->atom->map(3); eangle[2] = angle->energy; esingle[2] = angle->single(1, idx1, idx2, idx3); if (!verbose) ::testing::internal::CaptureStdout(); command("displace_atoms all random 0.5 0.5 0.5 9726532"); command("run 0 post no"); if (!verbose) ::testing::internal::GetCapturedStdout(); idx1 = lmp->atom->map(1); idx2 = lmp->atom->map(2); idx3 = lmp->atom->map(3); eangle[3] = angle->energy; esingle[3] = angle->single(1, idx1, idx2, idx3); ErrorStats stats; EXPECT_FP_LE_WITH_EPS(eangle[0], esingle[0], epsilon); EXPECT_FP_LE_WITH_EPS(eangle[1], esingle[1], epsilon); EXPECT_FP_LE_WITH_EPS(eangle[2], esingle[2], epsilon); EXPECT_FP_LE_WITH_EPS(eangle[3], esingle[3], epsilon); if (print_stats) std::cerr << "single_energy stats:" << stats << std::endl; int i = 0; for (auto &dist : test_config.equilibrium) EXPECT_NEAR(dist, angle->equilibrium_angle(++i), 0.00001); if (!verbose) ::testing::internal::CaptureStdout(); cleanup_lammps(lmp, test_config); if (!verbose) ::testing::internal::GetCapturedStdout(); } TEST(AngleStyle, extract) { if (test_config.skip_tests.count(test_info_->name())) GTEST_SKIP(); LAMMPS::argv args = {"AngleStyle", "-log", "none", "-echo", "screen", "-nocite"}; if (!verbose) ::testing::internal::CaptureStdout(); LAMMPS *lmp = init_lammps(args, test_config, true); if (!verbose) ::testing::internal::GetCapturedStdout(); if (!lmp) { std::cerr << "One or more prerequisite styles are not available " "in this LAMMPS configuration:\n"; for (auto prerequisite : test_config.prerequisites) { std::cerr << prerequisite.first << "_style " << prerequisite.second << "\n"; } GTEST_SKIP(); } auto angle = lmp->force->angle; void *ptr = nullptr; int dim = 0; for (auto extract : test_config.extract) { ptr = angle->extract(extract.first.c_str(), dim); EXPECT_NE(ptr, nullptr); EXPECT_EQ(dim, extract.second); } ptr = angle->extract("does_not_exist", dim); EXPECT_EQ(ptr, nullptr); for (int i = 1; i <= lmp->atom->nangletypes; ++i) EXPECT_GE(angle->equilibrium_angle(i), 0.0); if (!verbose) ::testing::internal::CaptureStdout(); cleanup_lammps(lmp, test_config); if (!verbose) ::testing::internal::GetCapturedStdout(); }