"LAMMPS WWW Site"_lws - "LAMMPS Documentation"_ld - "LAMMPS Commands"_lc :c :link(lws,http://lammps.sandia.gov) :link(ld,Manual.html) :link(lc,Section_commands.html#comm) :line pair_style lj/cut command :h3 pair_style lj/cut/opt command :h3 pair_style lj/cut/coul/cut command :h3 pair_style lj/cut/coul/debye command :h3 pair_style lj/cut/coul/long command :h3 pair_style lj/cut/coul/long/tip4p command :h3 [Syntax:] pair_style style args :pre style = {lj/cut} or {lj/cut/opt} or {lj/cut/coul/cut} or {lj/cut/coul/debye} \ or {lj/cut/coul/long} or {lj/cut/coul/long/tip4p} args = list of arguments for a particular style :ul {lj/cut} args = cutoff cutoff = global cutoff for Lennard Jones interactions (distance units) {lj/cut/opt} args = cutoff cutoff = global cutoff for Lennard Jones interactions (distance units) {lj/cut/coul/cut} args = cutoff (cutoff2) cutoff = global cutoff for LJ (and Coulombic if only 1 arg) (distance units) cutoff2 = global cutoff for Coulombic (optional) (distance units) {lj/cut/coul/debye} args = kappa cutoff (cutoff2) kappa = Debye length (inverse distance units) cutoff = global cutoff for LJ (and Coulombic if only 1 arg) (distance units) cutoff2 = global cutoff for Coulombic (optional) (distance units) {lj/cut/coul/long} args = cutoff (cutoff2) cutoff = global cutoff for LJ (and Coulombic if only 1 arg) (distance units) cutoff2 = global cutoff for Coulombic (optional) (distance units) {lj/cut/coul/long/tip4p} args = otype htype btype atype qdist cutoff (cutoff2) otype,htype = atom types for TIP4P O and H btype,atype = bond and angle types for TIP4P waters qdist = distance from O atom to massless charge (distance units) cutoff = global cutoff for LJ (and Coulombic if only 1 arg) (distance units) cutoff2 = global cutoff for Coulombic (optional) (distance units) :pre [Examples:] pair_style lj/cut 2.5 pair_style lj/cut/opt 2.5 pair_coeff * * 1 1 pair_coeff 1 1 1 1.1 2.8 :pre pair_style lj/cut/coul/cut 10.0 pair_style lj/cut/coul/cut 10.0 8.0 pair_coeff * * 100.0 3.0 pair_coeff 1 1 100.0 3.5 9.0 pair_coeff 1 1 100.0 3.5 9.0 9.0 :pre pair_style lj/cut/coul/debye 1.5 3.0 pair_style lj/cut/coul/debye 1.5 2.5 5.0 pair_coeff * * 1.0 1.0 pair_coeff 1 1 1.0 1.5 2.5 pair_coeff 1 1 1.0 1.5 2.5 5.0 :pre pair_style lj/cut/coul/long 10.0 pair_style lj/cut/coul/long 10.0 8.0 pair_coeff * * 100.0 3.0 pair_coeff 1 1 100.0 3.5 9.0 :pre pair_style lj/cut/coul/long/tip4p 1 2 7 8 0.3 12.0 pair_style lj/cut/coul/long/tip4p 1 2 7 8 0.3 12.0 10.0 pair_coeff * * 100.0 3.0 pair_coeff 1 1 100.0 3.5 9.0 :pre [Description:] The {lj/cut} styles compute the standard 6/12 Lennard-Jones potential, given by :c,image(Eqs/pair_lj.jpg) Rc is the cutoff. Style {lj/cut/opt} is an optimized version of style {lj/cut} that should give identical answers. Depending on system size and the processor you are running on, it may be 5-25% faster (for the pairwise portion of the run time). Style {lj/cut/coul/cut} adds a Coulombic pairwise interaction given by :c,image(Eqs/pair_coulomb.jpg) where C is an energy-conversion constant, Qi and Qj are the charges on the 2 atoms, and epsilon is the dielectric constant which can be set by the "dielectric"_dielectric.html command. If one cutoff is specified in the pair_style command, it is used for both the LJ and Coulombic terms. If two cutoffs are specified, they are used as cutoffs for the LJ and Coulombic terms respectively. Style {lj/cut/coul/debye} adds an additional exp() damping factor to the Coulombic term, given by :c,image(Eqs/pair_debye.jpg) where kappa is the Debye length. This potential is another way to mimic the screening effect of a polar solvent. Style {lj/cut/coul/long} computes the same Coulombic interactions as style {lj/cut/coul/cut} except that an additional damping factor is applied to the Coulombic term so it can be used in conjunction with the "kspace_style"_kspace_style.html command and its {ewald} or {pppm} option. The Coulombic cutoff specified for this style means that pairwise interactions within this distance are computed directly; interactions outside that distance are computed in K-space. Style {lj/cut/coul/long/tip4p} implements the TIP4P water model of "(Jorgensen)"_#Jorgensen, which introduces a massless site located a short distance away from the oxygen atom along the bisector of the HOH angle. The atomic types of the oxygen and hydrogen atoms, the bond and angle types for OH and HOH interactions, and the distance to the massless charge site are specified as pair_style arguments. IMPORTANT NOTE: For each TIP4P water molecule in your system, the atom IDs for the O and 2 H atoms must be consecutive, with the O atom first. This is to enable LAMMPS to "find" the 2 H atoms associated with each O atom. For example, if the atom ID of an O atom in a TIP4P water molecule is 500, then its 2 H atoms must have IDs 501 and 502. See the "howto section"_Section_howto.html#4_8 for more information on how to use the TIP4P pair style. The following coefficients must be defined for each pair of atoms types via the "pair_coeff"_pair_coeff.html command as in the examples above, or in the data file or restart files read by the "read_data"_read_data.html or "read_restart"_read_restart.html commands: epsilon (energy units) sigma (distance units) cutoff1 (distance units) cutoff2 (distance units) :ul Note that sigma is defined in the LJ formula as the zero-crossing distance for the potential, not as the energy minimum at 2^(1/6) sigma. The latter 2 coefficients are optional. If not specified, the global LJ and Coulombic cutoffs specified in the pair_style command are used. If only one cutoff is specified, it is used as the cutoff for both LJ and Coulombic interactions for this type pair. If both coefficients are specified, they are used as the LJ and Coulombic cutoffs for this type pair. You cannot specify 2 cutoffs for style {lj/cut}, since it has no Coulombic terms. For {lj/cut/coul/long} and {lj/cut/coul/long/tip4p} only the LJ cutoff can be specified since a Coulombic cutoff cannot be specified for an individual I,J type pair. All type pairs use the same global Coulombic cutoff specified in the pair_style command. [Restrictions:] The {lj/cut/coul/long} style is part of the "kspace" package. It is only enabled if LAMMPS was built with that package. The {lj/cut/opt} style is part of the "opt" package. It is only enabled if LAMMPS was built with that package. See the "Making LAMMPS"_Section_start.html#2_3 section for more info. On some 64-bit machines, compiling with -O3 appears to break the Coulombic tabling option used by the {lj/cut/coul/long} style. See the "Additional build tips" section of the Making LAMMPS documentation pages for workarounds on this issue. [Related commands:] "pair_coeff"_pair_coeff.html [Default:] none :line :link(Jorgensen) [(Jorgensen)] Jorgensen, Chandrasekhar, Madura, Impey, Klein, J Chem Phys, 79, 926 (1983).