# Created 2010-12-13 # General parameters variable sname index C2H6fc.bohr units electron newton on boundary f f f atom_style electron read_data data.${sname} pair_style eff/cut 1000.0 pair_coeff * * compute energies all pair eff/cut variable eke equal c_energies[1] variable epauli equal c_energies[2] variable estatics equal c_energies[3] variable errestrain equal c_energies[4] comm_modify vel yes compute peratom all stress/atom NULL compute p all reduce sum c_peratom[1] c_peratom[2] c_peratom[3] variable press equal -(c_p[1]+c_p[2]+c_p[3])/(3*vol) compute effTemp all temp/eff compute effPress all pressure effTemp thermo_style custom step etotal pe ke v_eke v_epauli v_estatics v_errestrain temp press v_press thermo_modify temp effTemp press effPress # Minimization min_style cg dump 1 all xyz 10 ${sname}.min.xyz compute 1 all property/atom spin eradius erforce dump 2 all custom 10 ${sname}.min.lammpstrj id type q c_1[1] c_1[2] x y z fx fy fz c_1[3] dump 3 all custom 10 data.${sname}.restart id type q c_1[1] c_1[2] x y z min_modify line quadratic minimize 0 1e-6 1000 2000 undump 1 undump 2 undump 3 fix 1 all nvt/eff temp 1 2000 1.0 dump 2 all custom 10 ${sname}.nvt.lammpstrj id type q c_1[1] c_1[2] x y z fx fy fz c_1[3] run 10000