/* ---------------------------------------------------------------------- LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator http://lammps.sandia.gov, Sandia National Laboratories Steve Plimpton, sjplimp@sandia.gov Copyright (2003) Sandia Corporation. Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains certain rights in this software. This software is distributed under the GNU General Public License. See the README file in the top-level LAMMPS directory. ------------------------------------------------------------------------- */ #ifdef DUMP_CLASS DumpStyle(custom,DumpCustom) #else #ifndef LMP_DUMP_CUSTOM_H #define LMP_DUMP_CUSTOM_H #include "dump.h" namespace LAMMPS_NS { class DumpCustom : public Dump { public: DumpCustom(class LAMMPS *, int, char **); virtual ~DumpCustom(); virtual void init(); double memory_usage(); protected: int nevery; // dump frequency to check Fix against int iregion; // -1 if no region, else which region int nthresh; // # of defined threshholds int *thresh_array; // array to threshhhold on for each nthresh int *thresh_op; // threshhold operation for each nthresh double *thresh_value; // threshhold value for each nthresh int nmine; // # of lines I am dumping int *vtype; // type of each vector (INT, DOUBLE) char **vformat; // format string for each vector element char *columns; // column labels int maxlocal; // size of atom selection and variable arrays int *choose; // 1 if output this atom, 0 if no double *dchoose; // value for each atom to threshhold against int nfield; // # of keywords listed by user int *field2index; // which compute,fix,variable calcs this field int *argindex; // index into compute,fix scalar_atom,vector_atom // 0 for scalar_atom, 1-N for vector_atom values int ncompute; // # of Compute objects used by dump char **id_compute; // their IDs class Compute **compute; // list of ptrs to the Compute objects int nfix; // # of Fix objects used by dump char **id_fix; // their IDs class Fix **fix; // list of ptrs to the Fix objects int nvariable; // # of Variables used by dump char **id_variable; // their names int *variable; // list of indices for the Variables double **vbuf; // local storage for variable evaluation // private methods virtual void write_header(int); int count(); int pack(); virtual void write_data(int, double *); void parse_fields(int, char **); int add_compute(char *); int add_fix(char *); int add_variable(char *); int modify_param(int, char **); virtual int modify_param2(int, char **) {return 0;} typedef void (DumpCustom::*FnPtrHeader)(int); FnPtrHeader header_choice; // ptr to write header functions void header_binary(int); void header_binary_triclinic(int); void header_item(int); void header_item_triclinic(int); typedef void (DumpCustom::*FnPtrData)(int, double *); FnPtrData write_choice; // ptr to write data functions void write_binary(int, double *); void write_text(int, double *); // customize by adding a method prototype typedef void (DumpCustom::*FnPtrPack)(int); FnPtrPack *pack_choice; // ptrs to pack functions void pack_id(int); void pack_molecule(int); void pack_type(int); void pack_mass(int); void pack_x(int); void pack_y(int); void pack_z(int); void pack_xs(int); void pack_ys(int); void pack_zs(int); void pack_xs_triclinic(int); void pack_ys_triclinic(int); void pack_zs_triclinic(int); void pack_xu(int); void pack_yu(int); void pack_zu(int); void pack_xu_triclinic(int); void pack_yu_triclinic(int); void pack_zu_triclinic(int); void pack_ix(int); void pack_iy(int); void pack_iz(int); void pack_vx(int); void pack_vy(int); void pack_vz(int); void pack_fx(int); void pack_fy(int); void pack_fz(int); void pack_q(int); void pack_mux(int); void pack_muy(int); void pack_muz(int); void pack_radius(int); void pack_omegax(int); void pack_omegay(int); void pack_omegaz(int); void pack_angmomx(int); void pack_angmomy(int); void pack_angmomz(int); void pack_quatw(int); void pack_quati(int); void pack_quatj(int); void pack_quatk(int); void pack_tqx(int); void pack_tqy(int); void pack_tqz(int); void pack_compute(int); void pack_fix(int); void pack_variable(int); }; } #endif #endif