LAMMPS (7 Jan 2012) using 4 OpenMP thread(s) per MPI task package gpu force 0 0 1.0 newton off units lj atom_style ellipsoid lattice sc 0.02 Lattice spacing in x,y,z = 3.68403 3.68403 3.68403 region box block 0 10 0 10 0 10 create_box 2 box Created orthogonal box = (0 0 0) to (36.8403 36.8403 36.8403) 1 by 1 by 3 MPI processor grid create_atoms 1 box Created 1000 atoms set group all type/fraction 2 0.5 14992 510 settings made for type/fraction set type 1 mass 1.5 490 settings made for mass set type 1 shape 1 1 3 490 settings made for shape set type 2 mass 1.3 510 settings made for mass set type 2 shape 1 1 2 510 settings made for shape set group all quat/random 982381 1000 settings made for quat/random compute rot all temp/asphere group spheroid type 1 490 atoms in group spheroid variable dof equal count(spheroid)+3 compute_modify rot extra ${dof} compute_modify rot extra 493 velocity all create 2.4 41787 loop geom pair_style resquared/gpu 7.0 pair_coeff 1 1 1.0 1.0 1.0 1.0 0.2 1.0 1.0 0.2 pair_coeff 1 2 1.0 1.0 1.0 1.0 0.2 1.0 1.0 0.4 pair_coeff 2 2 1.0 1.0 1.0 1.0 0.4 1.0 1.0 0.4 neighbor 0.8 bin timestep 0.002 thermo 100 fix 1 all npt/asphere temp 2.4 2.4 0.5 iso 0.0 8.0 0.5 compute_modify 1_temp extra ${dof} compute_modify 1_temp extra 493 run 400 Memory usage per processor = 6.4903 Mbytes Step Temp E_pair E_mol TotEng Press Volume 0 2.4 -0.0010583543 0 3.5953416 0.047891449 50000 100 3.4903605 0.035855557 0 5.2661607 0.14743729 30394.302 200 4.8969753 0.414991 0 7.7531085 0.73759537 16726.61 300 6.9012243 1.073296 0 11.414781 2.5787685 10413.316 400 8.8704661 2.0455354 0 15.337929 5.917377 7687.6551 Loop time of 1.94181 on 12 procs (3 MPI x 4 OpenMP) for 400 steps with 1000 atoms Pair time (%) = 1.566 (80.6463) Neigh time (%) = 0.0863432 (4.44653) Comm time (%) = 0.0413029 (2.12703) Outpt time (%) = 9.40164e-05 (0.00484169) Other time (%) = 0.248072 (12.7753) Nlocal: 333.333 ave 345 max 321 min Histogram: 1 0 0 0 0 1 0 0 0 1 Nghost: 3231.33 ave 3262 max 3214 min Histogram: 2 0 0 0 0 0 0 0 0 1 Neighs: 0 ave 0 max 0 min Histogram: 3 0 0 0 0 0 0 0 0 0 FullNghs: 84041.3 ave 87888 max 79791 min Histogram: 1 0 0 0 0 1 0 0 0 1 Total # of neighbors = 252124 Ave neighs/atom = 252.124 Neighbor list builds = 38 Dangerous builds = 36