// clang-format off /* ---------------------------------------------------------------------- LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator https://www.lammps.org/, Sandia National Laboratories Steve Plimpton, sjplimp@sandia.gov Copyright (2003) Sandia Corporation. Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains certain rights in this software. This software is distributed under the GNU General Public License. See the README file in the top-level LAMMPS directory. ------------------------------------------------------------------------- */ /* ---------------------------------------------------------------------- Contributing author: W. Michael Brown (Intel) ------------------------------------------------------------------------- */ #include "npair_intel.h" #include "comm.h" #include "domain.h" #include "modify.h" #include "omp_compat.h" using namespace LAMMPS_NS; /* ---------------------------------------------------------------------- */ NPairIntel::NPairIntel(LAMMPS *lmp) : NPair(lmp) { _fix = static_cast(modify->get_fix_by_id("package_intel")); if (!_fix) error->all(FLERR, "The 'package intel' command is required for /intel styles"); #ifdef _LMP_INTEL_OFFLOAD _cop = _fix->coprocessor_number(); _off_map_stencil = 0; #endif } /* ---------------------------------------------------------------------- */ #ifdef _LMP_INTEL_OFFLOAD NPairIntel::~NPairIntel() { if (_off_map_stencil) { const int * stencil = this->stencil; #pragma offload_transfer target(mic:_cop) \ nocopy(stencil:alloc_if(0) free_if(1)) } } #endif /* ---------------------------------------------------------------------- */ void NPairIntel::copy_neighbor_info() { NPair::copy_neighbor_info(); if (_fix->precision() == FixIntel::PREC_MODE_MIXED) copy_cutsq_info(_fix->get_mixed_buffers()); else if (_fix->precision() == FixIntel::PREC_MODE_DOUBLE) copy_cutsq_info(_fix->get_double_buffers()); else copy_cutsq_info(_fix->get_single_buffers()); } /* ---------------------------------------------------------------------- */ template void NPairIntel::copy_cutsq_info(IntelBuffers *buffers) { int tp1 = atom->ntypes + 1; int use_ghost_cut = 0; if (cutneighghostsq) use_ghost_cut = 1; buffers->set_ntypes(tp1, use_ghost_cut); flt_t **cutneighsqb = buffers->get_cutneighsq(); for (int i = 1; i <= atom->ntypes; i++) for (int j = 1; j <= atom->ntypes; j++) cutneighsqb[i][j] = cutneighsq[i][j]; flt_t **cutneighghostsqb; if (use_ghost_cut) { cutneighghostsqb = buffers->get_cutneighghostsq(); for (int i = 1; i <= atom->ntypes; i++) for (int j = 1; j <= atom->ntypes; j++) cutneighghostsqb[i][j] = cutneighghostsq[i][j]; } #ifdef _LMP_INTEL_OFFLOAD if (_cop < 0) return; int tp1sq = tp1 * tp1; flt_t * ocutneighsq = cutneighsqb[0]; #pragma offload_transfer target(mic:_cop) in(ocutneighsq: length(tp1sq)) if (use_ghost_cut) { flt_t * ocutneighghostsq = cutneighghostsqb[0]; #pragma offload_transfer target(mic:_cop) \ in(ocutneighghostsq: length(tp1sq)) } #endif } /* ---------------------------------------------------------------------- */ template void NPairIntel::bin_newton(const int offload, NeighList *list, IntelBuffers *buffers, const int astart, const int aend, const int offload_end) { if (aend-astart == 0) return; const int nall = atom->nlocal + atom->nghost; int nall_t = nall; #ifdef _LMP_INTEL_OFFLOAD if (offload_noghost && offload) nall_t = atom->nlocal; #endif const int pack_width = _fix->nbor_pack_width(); const ATOM_T * _noalias const x = buffers->get_x(); int * _noalias const intel_list = buffers->intel_list(list); const int e_nall = nall_t; const int molecular = atom->molecular; int *ns = nullptr; tagint *s = nullptr; int tag_size = 0, special_size; if (buffers->need_tag()) tag_size = e_nall; if (molecular != Atom::ATOMIC) { s = atom->special[0]; ns = atom->nspecial[0]; special_size = aend; } else { s = &buffers->_special_holder; ns = &buffers->_nspecial_holder; special_size = 0; } const tagint * _noalias const special = s; const int * _noalias const nspecial = ns; const int maxspecial = atom->maxspecial; const tagint * _noalias const tag = atom->tag; int * _noalias const ilist = list->ilist; int ** _noalias const firstneigh = list->firstneigh; int * _noalias const numneigh = list->numneigh; int * _noalias const cnumneigh = buffers->cnumneigh(); const int nstencil = this->nstencil; const int * _noalias const stencil = this->stencil; const flt_t * _noalias const cutneighsq = buffers->get_cutneighsq()[0]; const int ntypes = atom->ntypes + 1; const int nlocal = atom->nlocal; #ifndef _LMP_INTEL_OFFLOAD int * _noalias const mask = atom->mask; tagint * _noalias const molecule = atom->molecule; #endif int tnum; int * _noalias overflow; #ifdef _LMP_INTEL_OFFLOAD double *timer_compute; if (offload) { timer_compute = _fix->off_watch_neighbor(); tnum = buffers->get_off_threads(); overflow = _fix->get_off_overflow_flag(); _fix->stop_watch(TIME_HOST_NEIGHBOR); _fix->start_watch(TIME_OFFLOAD_LATENCY); } else #endif { tnum = comm->nthreads; overflow = _fix->get_overflow_flag(); } const int nthreads = tnum; const int maxnbors = buffers->get_max_nbors(); int * _noalias const atombin = buffers->get_atombin(); const int * _noalias const binpacked = buffers->get_binpacked(); const int xperiodic = domain->xperiodic; const int yperiodic = domain->yperiodic; const int zperiodic = domain->zperiodic; const flt_t xprd_half = domain->xprd_half; const flt_t yprd_half = domain->yprd_half; const flt_t zprd_half = domain->zprd_half; flt_t * _noalias const ncachex = buffers->get_ncachex(); flt_t * _noalias const ncachey = buffers->get_ncachey(); flt_t * _noalias const ncachez = buffers->get_ncachez(); int * _noalias const ncachej = buffers->get_ncachej(); int * _noalias const ncachejtype = buffers->get_ncachejtype(); tagint * _noalias const ncachetag = buffers->get_ncachetag(); const int ncache_stride = buffers->ncache_stride(); int sb = 1; if (special_flag[1] == 0) { sb = 2; if (special_flag[2] == 0) { sb = 3; if (special_flag[3] == 0) sb = 4; } } const int special_bound = sb; #ifdef _LMP_INTEL_OFFLOAD const int * _noalias const binhead = this->binhead; const int * _noalias const bins = this->bins; const int cop = _fix->coprocessor_number(); const int separate_buffers = _fix->separate_buffers(); #pragma offload target(mic:cop) if (offload) \ in(x:length(e_nall+1) alloc_if(0) free_if(0)) \ in(tag:length(tag_size) alloc_if(0) free_if(0)) \ in(special:length(special_size*maxspecial) alloc_if(0) free_if(0)) \ in(nspecial:length(special_size*3) alloc_if(0) free_if(0)) \ in(bins,binpacked:length(nall) alloc_if(0) free_if(0)) \ in(binhead:length(mbins+1) alloc_if(0) free_if(0)) \ in(cutneighsq:length(0) alloc_if(0) free_if(0)) \ in(firstneigh:length(0) alloc_if(0) free_if(0)) \ in(intel_list:length(0) alloc_if(0) free_if(0)) \ in(cnumneigh:length(0) alloc_if(0) free_if(0)) \ out(numneigh:length(0) alloc_if(0) free_if(0)) \ in(ilist:length(0) alloc_if(0) free_if(0)) \ in(atombin:length(aend) alloc_if(0) free_if(0)) \ in(stencil:length(nstencil) alloc_if(0) free_if(0)) \ in(ncachex,ncachey,ncachez,ncachej:length(0) alloc_if(0) free_if(0)) \ in(ncachejtype,ncachetag:length(0) alloc_if(0) free_if(0)) \ in(ncache_stride,maxnbors,nthreads,maxspecial,nstencil,e_nall,offload) \ in(offload_end,separate_buffers,astart,aend,nlocal,molecular) \ in(ntypes,xperiodic,yperiodic,zperiodic,xprd_half,yprd_half,zprd_half) \ in(pack_width,special_bound) \ out(overflow:length(5) alloc_if(0) free_if(0)) \ out(timer_compute:length(1) alloc_if(0) free_if(0)) \ signal(tag) #endif { #if defined(__MIC__) && defined(_LMP_INTEL_OFFLOAD) *timer_compute = MIC_Wtime(); #endif #ifdef _LMP_INTEL_OFFLOAD overflow[LMP_LOCAL_MIN] = astart; overflow[LMP_LOCAL_MAX] = aend - 1; overflow[LMP_GHOST_MIN] = e_nall; overflow[LMP_GHOST_MAX] = -1; #endif int nstencilp = 0; int binstart[INTEL_MAX_STENCIL], binend[INTEL_MAX_STENCIL]; for (int k = 0; k < nstencil; k++) { binstart[nstencilp] = stencil[k]; int end = stencil[k] + 1; for (int kk = k + 1; kk < nstencil; kk++) { if (stencil[kk-1]+1 == stencil[kk]) { end++; k++; } else break; } binend[nstencilp] = end; nstencilp++; } #if defined(_OPENMP) #pragma omp parallel LMP_DEFAULT_NONE \ shared(overflow, nstencilp, binstart, binend) #endif { #ifdef _LMP_INTEL_OFFLOAD int lmin = e_nall, lmax = -1, gmin = e_nall, gmax = -1; #endif const int num = aend - astart; int tid, ifrom, ito; if (THREE) { IP_PRE_omp_range_id_vec(ifrom, ito, tid, num, nthreads, pack_width); } else { IP_PRE_omp_range_id(ifrom, ito, tid, num, nthreads); } ifrom += astart; ito += astart; int e_ito = ito; #ifdef LMP_INTEL_3BODY_FAST if (THREE && ito == num) { int imod = ito & (pack_width - 1); if (imod) e_ito += pack_width - imod; } #endif const int list_size = (e_ito + tid * 2 + 2) * maxnbors; #ifdef LMP_INTEL_3BODY_FAST const int pack_offset = maxnbors * pack_width; const int obound = pack_offset + maxnbors * 2; #else const int pack_offset = 0; const int obound = maxnbors * 3; #endif int ct = (ifrom + tid * 2) * maxnbors; int * _noalias neighptr = intel_list + ct; int * _noalias neighptr2; if (THREE) neighptr2 = neighptr; const int toffs = tid * ncache_stride; flt_t * _noalias const tx = ncachex + toffs; flt_t * _noalias const ty = ncachey + toffs; flt_t * _noalias const tz = ncachez + toffs; int * _noalias const tj = ncachej + toffs; int * _noalias const tjtype = ncachejtype + toffs; tagint * _noalias const ttag = ncachetag + toffs; flt_t * _noalias itx; flt_t * _noalias ity; flt_t * _noalias itz; int * _noalias itj; int * _noalias itjtype; // loop over all atoms in other bins in stencil, store every pair int istart, icount, ncount, oldbin = -9999999; #ifdef LMP_INTEL_3BODY_FAST int lane, max_chunk; if (THREE) { lane = 0; max_chunk = 0; } #endif for (int i = ifrom; i < ito; i++) { const flt_t xtmp = x[i].x; const flt_t ytmp = x[i].y; const flt_t ztmp = x[i].z; const int itype = x[i].w; tagint itag; if (THREE) itag = tag[i]; const int ioffset = ntypes * itype; const int ibin = atombin[i]; if (ibin != oldbin) { oldbin = ibin; ncount = 0; for (int k = 0; k < nstencilp; k++) { const int bstart = binhead[ibin + binstart[k]]; const int bend = binhead[ibin + binend[k]]; #if defined(LMP_SIMD_COMPILER) #if defined(USE_OMP_SIMD) #pragma omp simd #else #pragma simd #endif #endif for (int jj = bstart; jj < bend; jj++) tj[ncount++] = binpacked[jj]; } #if defined(LMP_SIMD_COMPILER) #if defined(USE_OMP_SIMD) #pragma omp simd #else #pragma simd #endif #pragma vector aligned #endif for (int u = 0; u < ncount; u++) { const int j = IP_PRE_dword_index(tj[u]); tx[u] = x[j].x; ty[u] = x[j].y; tz[u] = x[j].z; tjtype[u] = x[j].w; if (THREE) ttag[u] = tag[j]; } if (FULL == 0 && TRI != 1) { icount = 0; istart = ncount; IP_PRE_edge_align(istart, sizeof(int)); itx = tx + istart; ity = ty + istart; itz = tz + istart; itj = tj + istart; itjtype = tjtype + istart; const int bstart = binhead[ibin]; const int bend = binhead[ibin + 1]; #if defined(LMP_SIMD_COMPILER) #if defined(USE_OMP_SIMD) #pragma omp simd #else #pragma simd #endif #endif for (int jj = bstart; jj < bend; jj++) { const int j = IP_PRE_dword_index(binpacked[jj]); itj[icount] = j; itx[icount] = x[j].x; ity[icount] = x[j].y; itz[icount] = x[j].z; itjtype[icount] = x[j].w; icount++; } if (icount + istart > obound) *overflow = 1; } else if (ncount > obound) *overflow = 1; } // ---------------------- Loop over i bin int n = 0; if (FULL == 0 && TRI != 1) { #if defined(LMP_SIMD_COMPILER) #pragma vector aligned #pragma ivdep #endif for (int u = 0; u < icount; u++) { int addme = 1; int j = itj[u]; // Cutoff Check const flt_t delx = xtmp - itx[u]; const flt_t dely = ytmp - ity[u]; const flt_t delz = ztmp - itz[u]; const int jtype = itjtype[u]; const flt_t rsq = delx * delx + dely * dely + delz * delz; if (rsq > cutneighsq[ioffset + jtype]) addme = 0; // i bin (half) check and offload ghost check if (j < nlocal) { const int ijmod = (i + j) & 1; if (i > j) { if (ijmod == 0) addme = 0; } else if (i < j) { if (ijmod == 1) addme = 0; } else addme = 0; #ifdef _LMP_INTEL_OFFLOAD if (offload_noghost && i < offload_end) addme = 0; #endif } else { #ifdef _LMP_INTEL_OFFLOAD if (offload_noghost && offload) addme = 0; #endif if (itz[u] < ztmp) addme = 0; if (itz[u] == ztmp) { if (ity[u] < ytmp) addme = 0; if (ity[u] == ytmp && itx[u] < xtmp) addme = 0; } } if (need_ic) { int no_special; ominimum_image_check(no_special, delx, dely, delz); if (no_special) j = -j - 1; } if (addme) neighptr[n++] = j; } } // if FULL==0 // ---------------------- Loop over other bins int n2; if (THREE) { #ifdef LMP_INTEL_3BODY_FAST n = pack_offset; #endif n2 = pack_offset + maxnbors; } #if defined(LMP_SIMD_COMPILER) #pragma vector aligned #pragma ivdep #endif for (int u = 0; u < ncount; u++) { int addme = 1; int j = tj[u]; if (FULL) if (i == j) addme = 0; // Cutoff Check const flt_t delx = xtmp - tx[u]; const flt_t dely = ytmp - ty[u]; const flt_t delz = ztmp - tz[u]; const int jtype = tjtype[u]; const flt_t rsq = delx * delx + dely * dely + delz * delz; if (rsq > cutneighsq[ioffset + jtype]) addme = 0; // Triclinic if (TRI) { if (tz[u] < ztmp) addme = 0; if (tz[u] == ztmp) { if (ty[u] < ytmp) addme = 0; if (ty[u] == ytmp) { if (tx[u] < xtmp) addme = 0; if (tx[u] == xtmp && j <= i) addme = 0; } } } // offload ghost check #ifdef _LMP_INTEL_OFFLOAD if (offload_noghost) { if (j < nlocal) { if (i < offload_end) addme = 0; } else if (offload) addme = 0; } #endif if (need_ic) { int no_special; ominimum_image_check(no_special, delx, dely, delz); if (no_special) j = -j - 1; } if (THREE) { const tagint jtag = ttag[u]; int flist = 0; if (itag > jtag) { if (((itag+jtag) & 1) == 0) flist = 1; } else if (itag < jtag) { if (((itag+jtag) & 1) == 1) flist = 1; } else { if (tz[u] < ztmp) flist = 1; else if (tz[u] == ztmp && ty[u] < ytmp) flist = 1; else if (tz[u] == ztmp && ty[u] == ytmp && tx[u] < xtmp) flist = 1; } if (addme) { if (flist) neighptr2[n2++] = j; else neighptr[n++] = j; } } else { if (addme) neighptr[n++] = j; } } // for u if (molecular != Atom::ATOMIC) { if (!THREE) neighptr2 = neighptr; int alln = n; n = pack_offset; #if defined(LMP_SIMD_COMPILER) #ifdef LMP_INTEL_NBOR_COMPAT #pragma ivdep #else #if defined(USE_OMP_SIMD) #pragma omp simd #else #pragma simd #endif #endif #pragma vector aligned #endif for (int u = n; u < alln; u++) { int which; int addme = 1; int j = neighptr[u]; if (need_ic && j < 0) { which = 0; j = -j - 1; } else ofind_special(which, special, nspecial, i, tag[j]); if (which) { j = j ^ (which << SBBITS); if (which < special_bound) addme = 0; } #ifdef LMP_INTEL_NBOR_COMPAT if (addme) neighptr2[n++] = j; #else neighptr2[n++]=j; #endif } if (THREE) { alln = n2; n2 = pack_offset + maxnbors; #if defined(LMP_SIMD_COMPILER) #ifdef LMP_INTEL_NBOR_COMPAT #pragma ivdep #else #if defined(USE_OMP_SIMD) #pragma omp simd #else #pragma simd #endif #endif #pragma vector aligned #endif for (int u = n2; u < alln; u++) { int which; int addme = 1; int j = neighptr[u]; if (need_ic && j < 0) { which = 0; j = -j - 1; } else ofind_special(which, special, nspecial, i, tag[j]); if (which) { j = j ^ (which << SBBITS); if (which < special_bound) addme = 0; } #ifdef LMP_INTEL_NBOR_COMPAT if (addme) neighptr2[n2++] = j; #else neighptr2[n2++]=j; #endif } } } #ifndef _LMP_INTEL_OFFLOAD if (exclude) { neighptr2 = neighptr; int alln = n; n = pack_offset; #if defined(LMP_SIMD_COMPILER) #pragma vector aligned #pragma ivdep #endif for (int u = n; u < alln; u++) { int addme = 1; const int js = neighptr[u]; const int j = js & NEIGHMASK; const int jtype = x[j].w; if (exclusion(i,j,itype,jtype,mask,molecule)) addme = 0; if (addme) neighptr2[n++] = js; } if (THREE) { alln = n2; n2 = pack_offset + maxnbors; #if defined(LMP_SIMD_COMPILER) #pragma vector aligned #pragma ivdep #endif for (int u = n2; u < alln; u++) { int addme = 1; const int js = neighptr[u]; const int j = js & NEIGHMASK; const int jtype = x[j].w; if (exclusion(i,j,itype,jtype,mask,molecule)) addme = 0; if (addme) neighptr2[n2++] = js; } } } #endif int ns; if (THREE) { ns = n - pack_offset; atombin[i] = ns; ns += n2 - pack_offset - maxnbors; #ifdef LMP_INTEL_3BODY_FAST int alln = n; n = lane; for (int u = pack_offset; u < alln; u++) { neighptr[n] = neighptr2[u]; n += pack_width; } #endif for (int u = pack_offset + maxnbors; u < n2; u++) { #ifdef LMP_INTEL_3BODY_FAST neighptr[n] = neighptr2[u]; n += pack_width; #else neighptr[n++] = neighptr2[u]; #endif } if (ns > maxnbors) *overflow = 1; } else if (n > maxnbors) *overflow = 1; ilist[i] = i; firstneigh[i] = intel_list + ct; if (THREE) { numneigh[i] = ns; cnumneigh[i] = ct; #ifdef LMP_INTEL_3BODY_FAST cnumneigh[i] += lane; #else // Pad anyways just in case we have hybrid with 2-body and newton off int pad_end = ns; IP_PRE_neighbor_pad(pad_end, offload); #if defined(LMP_SIMD_COMPILER) #pragma vector aligned #pragma loop_count min=1, max=INTEL_COMPILE_WIDTH-1, \ avg=INTEL_COMPILE_WIDTH/2 #endif for ( ; ns < pad_end; ns++) neighptr[n++] = e_nall; #endif } else { numneigh[i] = n; int pad_end = n; IP_PRE_neighbor_pad(pad_end, offload); #if defined(LMP_SIMD_COMPILER) #pragma vector aligned #pragma loop_count min=1, max=INTEL_COMPILE_WIDTH-1, \ avg=INTEL_COMPILE_WIDTH/2 #endif for ( ; n < pad_end; n++) neighptr[n] = e_nall; } #ifdef LMP_INTEL_3BODY_FAST if (THREE) { if (ns > max_chunk) max_chunk = ns; lane++; if (lane == pack_width) { ct += max_chunk * pack_width; IP_PRE_edge_align(ct, sizeof(int)); neighptr = intel_list + ct; neighptr2 = neighptr; max_chunk = 0; lane = 0; if (ct + obound > list_size) { if (i < ito - 1) { *overflow = 1; ct = (ifrom + tid * 2) * maxnbors; } } } } else #endif { ct += n; //IP_PRE_edge_align(ct, sizeof(int)); neighptr = intel_list + ct; if (THREE) neighptr2 = neighptr; if (ct + obound > list_size) { if (i < ito - 1) { *overflow = 1; ct = (ifrom + tid * 2) * maxnbors; } } } } if (*overflow == 1) for (int i = ifrom; i < ito; i++) numneigh[i] = 0; #ifdef _LMP_INTEL_OFFLOAD int vlmin = lmin, vlmax = lmax, vgmin = gmin, vgmax = gmax; int ghost_offset = 0, nall_offset = e_nall; if (separate_buffers) { for (int i = ifrom; i < ito; ++i) { int * _noalias jlist = firstneigh[i]; int jnum = numneigh[i]; if (!THREE) IP_PRE_neighbor_pad(jnum, offload); #if __INTEL_COMPILER+0 > 1499 #if defined(USE_OMP_SIMD) #pragma omp simd reduction(max:vlmax,vgmax) \ reduction(min:vlmin, vgmin) #else #pragma simd reduction(max:vlmax,vgmax) \ reduction(min:vlmin, vgmin) #endif #pragma vector aligned #endif for (int jj = 0; jj < jnum; jj++) { const int j = jlist[jj] & NEIGHMASK; if (j < nlocal) { if (j < vlmin) vlmin = j; if (j > vlmax) vlmax = j; } else { if (j < vgmin) vgmin = j; if (j > vgmax) vgmax = j; } } } lmin = MIN(lmin,vlmin); gmin = MIN(gmin,vgmin); lmax = MAX(lmax,vlmax); gmax = MAX(gmax,vgmax); #if defined(_OPENMP) #pragma omp critical #endif { if (lmin < overflow[LMP_LOCAL_MIN]) overflow[LMP_LOCAL_MIN] = lmin; if (lmax > overflow[LMP_LOCAL_MAX]) overflow[LMP_LOCAL_MAX] = lmax; if (gmin < overflow[LMP_GHOST_MIN]) overflow[LMP_GHOST_MIN] = gmin; if (gmax > overflow[LMP_GHOST_MAX]) overflow[LMP_GHOST_MAX] = gmax; } #pragma omp barrier int nghost = overflow[LMP_GHOST_MAX] + 1 - overflow[LMP_GHOST_MIN]; if (nghost < 0) nghost = 0; if (offload) { ghost_offset = overflow[LMP_GHOST_MIN] - overflow[LMP_LOCAL_MAX] - 1; nall_offset = overflow[LMP_LOCAL_MAX] + 1 + nghost; } else { ghost_offset = overflow[LMP_GHOST_MIN] - nlocal; nall_offset = nlocal + nghost; } for (int i = ifrom; i < ito; ++i) { int * _noalias jlist = firstneigh[i]; int jnum = numneigh[i]; if (!THREE) IP_PRE_neighbor_pad(jnum, offload); int jj = 0; #if defined(USE_OMP_SIMD) #pragma omp simd #else #pragma simd #endif #pragma vector aligned for (jj = 0; jj < jnum; jj++) { const int which = jlist[jj] >> SBBITS & 3; const int j = jlist[jj] & NEIGHMASK; if (j >= nlocal) { if (j == e_nall) jlist[jj] = nall_offset; else jlist[jj] = (j - ghost_offset) ^ (which << SBBITS); } } } } #endif } // end omp #if defined(__MIC__) && defined(_LMP_INTEL_OFFLOAD) *timer_compute = MIC_Wtime() - *timer_compute; #endif } // end offload #ifdef _LMP_INTEL_OFFLOAD if (offload) { _fix->stop_watch(TIME_OFFLOAD_LATENCY); _fix->start_watch(TIME_HOST_NEIGHBOR); firstneigh[0] = intel_list; for (int n = 0; n < aend; n++) { ilist[n] = n; numneigh[n] = 0; } } else { if (separate_buffers) { _fix->start_watch(TIME_PACK); _fix->set_neighbor_host_sizes(); buffers->pack_sep_from_single(_fix->host_min_local(), _fix->host_used_local(), _fix->host_min_ghost(), _fix->host_used_ghost()); _fix->stop_watch(TIME_PACK); } } #endif } /* ---------------------------------------------------------------------- */ #ifdef _LMP_INTEL_OFFLOAD void NPairIntel::grow_stencil() { if (_off_map_stencil != stencil) { if (_off_map_stencil) { const int * stencil = _off_map_stencil; #pragma offload_transfer target(mic:_cop) \ nocopy(stencil:alloc_if(0) free_if(1)) } _off_map_stencil = stencil; const int * stencil = _off_map_stencil; const int maxstencil = ns->get_maxstencil(); #pragma offload_transfer target(mic:_cop) \ in(stencil:length(maxstencil) alloc_if(1) free_if(0)) } } #endif /* ---------------------------------------------------------------------- */ // ---- Half, no IC template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); // ---- Half, IC template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); // ---- Tri, no IC template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); // ---- Tri, IC template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); // ---- Full, no IC template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); // ---- Full, IC template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); // ---- 3-body, no IC template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); // ---- 3-body, IC template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); #ifdef _LMP_INTEL_OFFLOAD // ---- Half, no IC, no ghost template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); // ---- Half, IC, no ghost template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); // ---- Tri, no IC, no ghost template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); // ---- Tri, IC, no ghost template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); // ---- Full, no IC, no ghost template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); // ---- Full, IC, no ghost template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); // ---- 3-body, no IC, no ghost template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); // ---- 3-body, IC, no ghost template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); template void NPairIntel::bin_newton (const int, NeighList *, IntelBuffers *, const int, const int, const int); #endif