/* ---------------------------------------------------------------------- LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator http://lammps.sandia.gov, Sandia National Laboratories Steve Plimpton, sjplimp@sandia.gov Copyright (2003) Sandia Corporation. Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains certain rights in this software. This software is distributed under the GNU General Public License. See the README file in the top-level LAMMPS directory. ------------------------------------------------------------------------- */ #include "math.h" #include "stdlib.h" #include "string.h" #include "fix_dt_reset.h" #include "atom.h" #include "update.h" #include "integrate.h" #include "domain.h" #include "lattice.h" #include "force.h" #include "pair.h" #include "modify.h" #include "fix.h" #include "output.h" #include "dump.h" #include "comm.h" #include "error.h" using namespace LAMMPS_NS; #define BIG 1.0e20 #define MIN(A,B) ((A) < (B)) ? (A) : (B) #define MAX(A,B) ((A) > (B)) ? (A) : (B) /* ---------------------------------------------------------------------- */ FixDtReset::FixDtReset(LAMMPS *lmp, int narg, char **arg) : Fix(lmp, narg, arg) { if (narg < 7) error->all("Illegal fix dt/reset command"); scalar_flag = 1; vector_flag = 1; size_vector = 1; scalar_vector_freq = 1; extscalar = 0; extvector = 0; nevery = atoi(arg[3]); if (nevery <= 0) error->all("Illegal fix dt/reset command"); minbound = maxbound = 1; tmin = tmax = 0.0; if (strcmp(arg[4],"INF") == 0) minbound = 0; else tmin = atof(arg[4]); if (strcmp(arg[5],"INF") == 0) maxbound = 0; else tmax = atof(arg[5]); xmax = atof(arg[6]); if (minbound && tmin < 0.0) error->all("Illegal fix dt/reset command"); if (maxbound && tmax < 0.0) error->all("Illegal fix dt/reset command"); if (minbound && maxbound && tmin > tmax) error->all("Illegal fix dt/reset command"); if (xmax <= 0.0) error->all("Illegal fix dt/reset command"); int scaleflag = 1; int iarg = 7; while (iarg < narg) { if (strcmp(arg[iarg],"units") == 0) { if (iarg+2 > narg) error->all("Illegal fix dt/reset command"); if (strcmp(arg[iarg+1],"box") == 0) scaleflag = 0; else if (strcmp(arg[iarg+1],"lattice") == 0) scaleflag = 1; else error->all("Illegal fix dt/reset command"); iarg += 2; } else error->all("Illegal fix dt/reset command"); } // setup scaling, based on xlattice parameter if (scaleflag && domain->lattice == NULL) error->all("Use of fix dt/reset with undefined lattice"); if (scaleflag) xmax *= domain->lattice->xlattice; // initializations t_elapsed = 0.0; laststep = update->ntimestep; } /* ---------------------------------------------------------------------- */ int FixDtReset::setmask() { int mask = 0; mask |= END_OF_STEP; return mask; } /* ---------------------------------------------------------------------- */ void FixDtReset::init() { // set rRESPA flag respaflag = 0; if (strcmp(update->integrate_style,"respa") == 0) respaflag = 1; // check for DCD or XTC dumps for (int i = 0; i < output->ndump; i++) if ((strcmp(output->dump[i]->style,"dcd") == 0 || strcmp(output->dump[i]->style,"xtc") == 0) && comm->me == 0) error->warning("Dump dcd/xtc timestamp may be wrong with fix dt/reset"); } /* ---------------------------------------------------------------------- */ void FixDtReset::setup(int vflag) { end_of_step(); } /* ---------------------------------------------------------------------- */ void FixDtReset::end_of_step() { // accumulate total time based on previous timestep t_elapsed += (update->ntimestep - laststep) * update->dt; // compute vmax and amax of any atom in group double **v = atom->v; double **f = atom->f; double *mass = atom->mass; double *rmass = atom->rmass; int *type = atom->type; int *mask = atom->mask; int nlocal = atom->nlocal; double vsq,fsq,asq,ms; double bound[2],bound_all[2]; bound[0] = bound[1] = 0.0; for (int i = 0; i < nlocal; i++) if (mask[i] & groupbit) { vsq = v[i][0]*v[i][0] + v[i][1]*v[i][1] + v[i][2]*v[i][2]; fsq = f[i][0]*f[i][0] + f[i][1]*f[i][1] + f[i][2]*f[i][2]; if (mass) ms = mass[type[i]]; else ms = rmass[i]; asq = fsq/ms/ms; bound[0] = MAX(bound[0],vsq); bound[1] = MAX(bound[1],asq); } MPI_Allreduce(bound,bound_all,2,MPI_DOUBLE,MPI_MAX,world); // set new timestep double dt,dt1,dt2; if (bound_all[0] > 0.0) dt1 = xmax/sqrt(bound_all[0]); else dt1 = BIG; if (bound_all[1] > 0.0) dt2 = sqrt(2.0 * xmax/sqrt(bound_all[1])); else dt2 = BIG; dt = MIN(dt1,dt2); if (minbound) dt = MAX(dt,tmin); if (maxbound) dt = MIN(dt,tmax); // reset update->dt and other classes that depend on it // rRESPA, pair style, fixes laststep = update->ntimestep; if (dt == update->dt) return; update->dt = dt; if (respaflag) update->integrate->reset_dt(); if (force->pair) force->pair->reset_dt(); for (int i = 0; i < modify->nfix; i++) modify->fix[i]->reset_dt(); } /* ---------------------------------------------------------------------- */ double FixDtReset::compute_scalar() { return update->dt; } /* ---------------------------------------------------------------------- */ double FixDtReset::compute_vector(int n) { return t_elapsed; }