"LAMMPS WWW Site"_lws - "LAMMPS Documentation"_ld - "LAMMPS Commands"_lc :c :link(lws,http://lammps.sandia.gov) :link(ld,Manual.html) :link(lc,Section_commands.html#comm) :line fix nph/asphere command :h3 fix nph/asphere/omp command :h3 [Syntax:] fix ID group-ID nph/asphere args keyword value ... :pre ID, group-ID are documented in "fix"_fix.html command nph/asphere = style name of this fix command additional barostat related keyword/value pairs from the "fix nph"_fix_nh.html command can be appended :ul [Examples:] fix 1 all nph/asphere iso 0.0 0.0 1000.0 fix 2 all nph/asphere x 5.0 5.0 1000.0 fix 2 all nph/asphere x 5.0 5.0 1000.0 drag 0.2 fix 2 water nph/asphere aniso 0.0 0.0 1000.0 dilate partial :pre [Description:] Perform constant NPH integration to update position, velocity, orientation, and angular velocity each timestep for aspherical or ellipsoidal particles in the group using a Nose/Hoover pressure barostat. P is pressure; H is enthalpy. This creates a system trajectory consistent with the isenthalpic ensemble. This fix differs from the "fix nph"_fix_nh.html command, which assumes point particles and only updates their position and velocity. Additional parameters affecting the barostat are specified by keywords and values documented with the "fix nph"_fix_nh.html command. See, for example, discussion of the {aniso}, and {dilate} keywords. The particles in the fix group are the only ones whose velocities and positions are updated by the velocity/position update portion of the NPH integration. Regardless of what particles are in the fix group, a global pressure is computed for all particles. Similarly, when the size of the simulation box is changed, all particles are re-scaled to new positions, unless the keyword {dilate} is specified with a value of {partial}, in which case only the particles in the fix group are re-scaled. The latter can be useful for leaving the coordinates of particles in a solid substrate unchanged and controlling the pressure of a surrounding fluid. :line This fix computes a temperature and pressure each timestep. To do this, the fix creates its own computes of style "temp/asphere" and "pressure", as if these commands had been issued: compute fix-ID_temp all temp/asphere compute fix-ID_press all pressure fix-ID_temp :pre See the "compute temp/asphere"_compute_temp_asphere.html and "compute pressure"_compute_pressure.html commands for details. Note that the IDs of the new computes are the fix-ID + underscore + "temp" or fix_ID + underscore + "press", and the group for the new computes is "all" since pressure is computed for the entire system. Note that these are NOT the computes used by thermodynamic output (see the "thermo_style"_thermo_style.html command) with ID = {thermo_temp} and {thermo_press}. This means you can change the attributes of this fix's temperature or pressure via the "compute_modify"_compute_modify.html command or print this temperature or pressure during thermodynamic output via the "thermo_style custom"_thermo_style.html command using the appropriate compute-ID. It also means that changing attributes of {thermo_temp} or {thermo_press} will have no effect on this fix. :line Styles with a {cuda}, {gpu}, {intel}, {kk}, {omp}, or {opt} suffix are functionally the same as the corresponding style without the suffix. They have been optimized to run faster, depending on your available hardware, as discussed in "Section_accelerate"_Section_accelerate.html of the manual. The accelerated styles take the same arguments and should produce the same results, except for round-off and precision issues. These accelerated styles are part of the USER-CUDA, GPU, USER-INTEL, KOKKOS, USER-OMP and OPT packages, respectively. They are only enabled if LAMMPS was built with those packages. See the "Making LAMMPS"_Section_start.html#start_3 section for more info. You can specify the accelerated styles explicitly in your input script by including their suffix, or you can use the "-suffix command-line switch"_Section_start.html#start_7 when you invoke LAMMPS, or you can use the "suffix"_suffix.html command in your input script. See "Section_accelerate"_Section_accelerate.html of the manual for more instructions on how to use the accelerated styles effectively. [Restart, fix_modify, output, run start/stop, minimize info:] This fix writes the state of the Nose/Hoover barostat to "binary restart files"_restart.html. See the "read_restart"_read_restart.html command for info on how to re-specify a fix in an input script that reads a restart file, so that the operation of the fix continues in an uninterrupted fashion. The "fix_modify"_fix_modify.html {temp} and {press} options are supported by this fix. You can use them to assign a "compute"_compute.html you have defined to this fix which will be used in its thermostatting or barostatting procedure. If you do this, note that the kinetic energy derived from the compute temperature should be consistent with the virial term computed using all atoms for the pressure. LAMMPS will warn you if you choose to compute temperature on a subset of atoms. The "fix_modify"_fix_modify.html {energy} option is supported by this fix to add the energy change induced by Nose/Hoover barostatting to the system's potential energy as part of "thermodynamic output"_thermo_style.html. This fix computes the same global scalar and global vector of quantities as does the "fix nph"_fix_nh.html command. This fix can ramp its target pressure over multiple runs, using the {start} and {stop} keywords of the "run"_run.html command. See the "run"_run.html command for details of how to do this. This fix is not invoked during "energy minimization"_minimize.html. [Restrictions:] This fix is part of the ASPHERE package. It is only enabled if LAMMPS was built with that package. See the "Making LAMMPS"_Section_start.html#start_3 section for more info. This fix requires that atoms store torque and angular momementum and a quaternion as defined by the "atom_style ellipsoid"_atom_style.html command. All particles in the group must be finite-size. They cannot be point particles, but they can be aspherical or spherical as defined by their shape attribute. [Related commands:] "fix nph"_fix_nh.html, "fix nve_asphere"_fix_nve_asphere.html, "fix nvt_asphere"_fix_nvt_asphere.html, "fix npt_asphere"_fix_npt_asphere.html, "fix_modify"_fix_modify.html [Default:] none