variable sname index ch4 log ${sname}.nve.log units electron newton on boundary f f f atom_style electron read_data data.${sname} pair_style eff/cut 100.0 pair_coeff * * comm_modify vel yes compute effTemp all temp/eff compute energies all pair eff/cut variable eke equal c_energies[1] variable epauli equal c_energies[2] variable ecoul equal c_energies[3] variable erres equal c_energies[4] thermo 1 thermo_style custom step etotal pe ke v_eke v_epauli v_ecoul v_erres min_style cg compute 1 all property/atom spin eradius erforce dump 2 all custom 10 ${sname}.min.lammpstrj id type q c_1[1] c_1[2] x y z fx fy fz c_1[3] minimize 0 1e-6 2000 4000