#===========================================================================#
# Drag force on a single sphere.                                            #
#                                                                           #
# Here, gamma (used in the calculation of the particle-fluid interaction    #
#   force) is calculated by default.  The resulting equilibrium drag force  #
#   should correspond to the Stokes drag force on a sphere with a slightly  #
#   larger "hydrodynamic" radius, than that given by the placement of the   #
#   particle nodes.                                                         #
#                                                                           #
# Sample output from this run can be found in the file:                     #
#   'defaultgamma_drag.out'                                                 #
#===========================================================================#

units          micro
dimension      3
boundary       p p f
atom_style     atomic

#----------------------------------------------------------------------------
# Need a neighbor bin size smaller than the lattice-Boltzmann grid spacing
#   to ensure that the particles belonging to a given processor remain inside
#   that processors lattice-Boltzmann grid.
# The arguments for neigh_modify have been set to "delay 0 every 1", again
#   to ensure that the particles belonging to a given processor remain inside
#   that processors lattice-Boltzmann grid.  However, these values can likely
#   be somewhat increased without issue.  If a problem does arise (a particle
#   is outside of its processors LB grid) an error message is printed and 
#   the simulation is terminated.             
#----------------------------------------------------------------------------
neighbor       1.0 bin
neigh_modify   delay 0 every 1

read_data      data.one_radius16d2

#----------------------------------------------------------------------------
# None of the particles comprising the spherical colloidal object should
#   interact with one another.
#----------------------------------------------------------------------------
pair_style	lj/cut 2.45
pair_coeff	* * 0.0 0.0 2.45
neigh_modify    exclude type 1 1 

#----------------------------------------------------------------------------
# Need to use a large particle mass in order to approximate an infintely
# massive particle, moving at constant velocity through the fluid.
#----------------------------------------------------------------------------
mass * 10000.0  
timestep 3.0

velocity all set 0.0 0.0001 0.0 units box

#---------------------------------------------------------------------------
# Create a lattice-Boltzmann fluid covering the simulation domain.
# All of the particles in the simulation apply a force to the fluid.
# Use the standard LB integration scheme, a fluid density = 1.0, 
#   fluid viscosity = 1.0, lattice spacing dx=4.0, and mass unit, dm=10.0.
# Use the default method to calculate the interaction force between the 
#   particles and the fluid.  This calculation requires the surface area 
#   of the composite object represented by each particle node.  By default 
#   this area is assumed equal to dx*dx; however, since this is not the case
#   here, it is input through the setArea keyword (i.e. particles of type 1 
#   correspond to a surface area of 10.3059947).
# Use the trilinear interpolation stencil to distribute the force from
#   a given particle onto the fluid mesh (results in a smaller hydrodynamic
#   radius than if the Peskin stencil is used).
# Print the force and torque acting on the particle to the screen at each 
#   timestep.
#----------------------------------------------------------------------------
fix	1 all lb/fluid 1 1 1.0 1.0 setArea 1 10.3059947 dx 4.0 dm 10.0 trilinear calcforce 10 all

#---------------------------------------------------------------------------
# For this simulation the colloidal particle moves at a constant velocity
#   through the fluid.  As such, we do not wish to apply the force from
#   the fluid back onto the object.  Therefore, we do not use any of the
#   viscous_lb, rigid_pc_sphere, or pc fixes, and simply integrate the 
#   particle motion using one of the built-in LAMMPS integrators.
#---------------------------------------------------------------------------
fix     2 all nve

run	100000