/* ---------------------------------------------------------------------- LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator http://lammps.sandia.gov, Sandia National Laboratories Steve Plimpton, sjplimp@sandia.gov Copyright (2003) Sandia Corporation. Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains certain rights in this software. This software is distributed under the GNU General Public License. See the README file in the top-level LAMMPS directory. ------------------------------------------------------------------------- */ #include "fix_dt_reset.h" #include #include #include #include "atom.h" #include "update.h" #include "integrate.h" #include "domain.h" #include "lattice.h" #include "force.h" #include "pair.h" #include "modify.h" #include "fix.h" #include "output.h" #include "dump.h" #include "comm.h" #include "error.h" using namespace LAMMPS_NS; using namespace FixConst; #define BIG 1.0e20 /* ---------------------------------------------------------------------- */ FixDtReset::FixDtReset(LAMMPS *lmp, int narg, char **arg) : Fix(lmp, narg, arg) { if (narg < 7) error->all(FLERR,"Illegal fix dt/reset command"); // set time_depend, else elapsed time accumulation can be messed up time_depend = 1; scalar_flag = 1; global_freq = 1; extscalar = 0; extvector = 0; dynamic_group_allow = 1; nevery = force->inumeric(FLERR,arg[3]); if (nevery <= 0) error->all(FLERR,"Illegal fix dt/reset command"); minbound = maxbound = 1; tmin = tmax = 0.0; if (strcmp(arg[4],"NULL") == 0) minbound = 0; else tmin = force->numeric(FLERR,arg[4]); if (strcmp(arg[5],"NULL") == 0) maxbound = 0; else tmax = force->numeric(FLERR,arg[5]); xmax = force->numeric(FLERR,arg[6]); if (minbound && tmin < 0.0) error->all(FLERR,"Illegal fix dt/reset command"); if (maxbound && tmax < 0.0) error->all(FLERR,"Illegal fix dt/reset command"); if (minbound && maxbound && tmin >= tmax) error->all(FLERR,"Illegal fix dt/reset command"); if (xmax <= 0.0) error->all(FLERR,"Illegal fix dt/reset command"); int scaleflag = 1; emax = -1.0; int iarg = 7; while (iarg < narg) { if (strcmp(arg[iarg],"units") == 0) { if (iarg+2 > narg) error->all(FLERR,"Illegal fix dt/reset command"); if (strcmp(arg[iarg+1],"box") == 0) scaleflag = 0; else if (strcmp(arg[iarg+1],"lattice") == 0) scaleflag = 1; else error->all(FLERR,"Illegal fix dt/reset command"); iarg += 2; } else if (strcmp(arg[iarg],"emax") == 0) { if (iarg+2 > narg) error->all(FLERR,"Illegal fix dt/reset command"); emax = force->numeric(FLERR,arg[iarg+1]); if (emax <= 0.0) error->all(FLERR,"Illegal fix dt/reset command"); iarg += 2; } else error->all(FLERR,"Illegal fix dt/reset command"); } // setup scaling, based on xlattice parameter if (scaleflag) xmax *= domain->lattice->xlattice; // initializations t_laststep = 0.0; laststep = update->ntimestep; } /* ---------------------------------------------------------------------- */ int FixDtReset::setmask() { int mask = 0; mask |= END_OF_STEP; return mask; } /* ---------------------------------------------------------------------- */ void FixDtReset::init() { // set rRESPA flag respaflag = 0; if (strstr(update->integrate_style,"respa")) respaflag = 1; // check for DCD or XTC dumps for (int i = 0; i < output->ndump; i++) if ((strcmp(output->dump[i]->style,"dcd") == 0 || strcmp(output->dump[i]->style,"xtc") == 0) && comm->me == 0) error->warning(FLERR, "Dump dcd/xtc timestamp may be wrong with fix dt/reset"); ftm2v = force->ftm2v; mvv2e = force->mvv2e; dt = update->dt; } /* ---------------------------------------------------------------------- */ void FixDtReset::setup(int /*vflag*/) { end_of_step(); } /* ---------------------------------------------------------------------- */ void FixDtReset::end_of_step() { double dtv,dtf,dte,dtsq; double vsq,fsq,massinv; double delx,dely,delz,delr; double **v = atom->v; double **f = atom->f; double *mass = atom->mass; double *rmass = atom->rmass; int *type = atom->type; int *mask = atom->mask; int nlocal = atom->nlocal; double dtmin = BIG; for (int i = 0; i < nlocal; i++) if (mask[i] & groupbit) { if (rmass) massinv = 1.0/rmass[i]; else massinv = 1.0/mass[type[i]]; vsq = v[i][0]*v[i][0] + v[i][1]*v[i][1] + v[i][2]*v[i][2]; fsq = f[i][0]*f[i][0] + f[i][1]*f[i][1] + f[i][2]*f[i][2]; dtv = dtf = dte = BIG; if (vsq > 0.0) dtv = xmax/sqrt(vsq); if (fsq > 0.0) dtf = sqrt(2.0*xmax/(ftm2v*sqrt(fsq)*massinv)); dt = MIN(dtv,dtf); if (emax > 0.0 && vsq > 0.0 && fsq > 0.0) { dte = emax/sqrt(fsq*vsq)/sqrt(ftm2v*mvv2e); dt = MIN(dt, dte); } dtsq = dt*dt; delx = dt*v[i][0] + 0.5*dtsq*massinv*f[i][0] * ftm2v; dely = dt*v[i][1] + 0.5*dtsq*massinv*f[i][1] * ftm2v; delz = dt*v[i][2] + 0.5*dtsq*massinv*f[i][2] * ftm2v; delr = sqrt(delx*delx + dely*dely + delz*delz); if (delr > xmax) dt *= xmax/delr; dtmin = MIN(dtmin,dt); } MPI_Allreduce(&dtmin,&dt,1,MPI_DOUBLE,MPI_MIN,world); if (minbound) dt = MAX(dt,tmin); if (maxbound) dt = MIN(dt,tmax); // if timestep didn't change, just return // else reset update->dt and other classes that depend on it // rRESPA, pair style, fixes if (dt == update->dt) return; laststep = update->ntimestep; update->update_time(); update->dt = dt; if (respaflag) update->integrate->reset_dt(); if (force->pair) force->pair->reset_dt(); for (int i = 0; i < modify->nfix; i++) modify->fix[i]->reset_dt(); } /* ---------------------------------------------------------------------- */ double FixDtReset::compute_scalar() { return (double) laststep; }