/* -*- c++ -*- ---------------------------------------------------------- LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator http://lammps.sandia.gov, Sandia National Laboratories Steve Plimpton, sjplimp@sandia.gov Copyright (2003) Sandia Corporation. Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains certain rights in this software. This software is distributed under the GNU General Public License. See the README file in the top-level LAMMPS directory. ------------------------------------------------------------------------- */ /* ---------------------------------------------------------------------- MyPage = templated class for storing chunks of datums in pages chunks are not returnable, can only reset and start over replaces many small mallocs with a few large mallocs pages are never freed, so can reuse w/out reallocs usage: request one datum at a time, repeat, clear request chunks of datums in each get() or vget(), repeat, clear chunk size can vary from request to request chunk size can be known in advance or registered after usage via vgot() inputs: template T = one datum, e.g. int, double, struct, int[3] for int[3], access datum as ivec[i][2] methods: T *get() = return ptr to one datum T *get(N) = return ptr to N datums, N < maxchunk required T *vget() = return ptr to maxchunk datums, use as needed, then call vgot() all gets return NULL if error encountered vgot(N) = used N datums of previous vget(), N < maxchunk required void init(maxchunk, pagesize, pagedelta) define allocation params and allocate first page(s) call right after constructor can call again to reset allocation params and free previous pages maxchunk = max # of datums in one chunk, default = 1 pagesize = # of datums in one page, default = 1024 should be big enough to store multiple chunks pagedelta = # of pages to allocate at a time, default = 1 return 1 if bad params void reset() = clear pages w/out freeing int size() = return total size of allocated pages in bytes int status() = return error status 0 = ok, 1 = chunksize > maxchunk, 2 = allocation error ------------------------------------------------------------------------- */ #ifndef LAMMPS_MY_PAGE_H #define LAMMPS_MY_PAGE_H #if defined(LMP_USER_INTEL) && !defined(LAMMPS_MEMALIGN) #define LAMMPS_MEMALIGN 64 #endif #include namespace LAMMPS_NS { template class MyPage { public: int ndatum; // total # of stored datums int nchunk; // total # of stored chunks MyPage() { ndatum = nchunk = 0; pages = NULL; npage = 0; errorflag = 0; } // (re)initialize allocation params // also allocate first page(s) int init(int user_maxchunk = 1, int user_pagesize = 1024, int user_pagedelta = 1) { maxchunk = user_maxchunk; pagesize = user_pagesize; pagedelta = user_pagedelta; if (maxchunk <= 0 || pagesize <= 0 || pagedelta <= 0) return 1; if (maxchunk > pagesize) return 1; // free any previously allocated pages for (int i = 0; i < npage; i++) free(pages[i]); free(pages); // initial page allocation ndatum = nchunk = 0; pages = NULL; npage = 0; allocate(); if (errorflag) return 2; ipage = index = 0; page = pages[ipage]; return 0; } // free all allocated pages ~MyPage() { for (int i = 0; i < npage; i++) free(pages[i]); free(pages); } // get ptr to one datum // return NULL if run out of memory T *get() { ndatum++; nchunk++; if (index < pagesize) return &page[index++]; ipage++; if (ipage == npage) { allocate(); if (errorflag) return NULL; } page = pages[ipage]; index = 0; return &page[index++]; } // get ptr to location that can store N datums // error if N > maxchunk // return NULL if run out of memory T *get(int n) { if (n > maxchunk) { errorflag = 1; return NULL; } ndatum += n; nchunk++; if (index+n <= pagesize) { int start = index; index += n; return &page[start]; } ipage++; if (ipage == npage) { allocate(); if (errorflag) return NULL; } page = pages[ipage]; index = n; return &page[0]; } // get ptr to location that can store maxchunk datums // will return same ptr as previous call if vgot() not called // return NULL if run out of memory T *vget() { if (index+maxchunk <= pagesize) return &page[index]; ipage++; if (ipage == npage) { allocate(); if (errorflag) return NULL; } page = pages[ipage]; index = 0; return &page[index]; } // increment by N = # of values stored in loc returned by vget() // OK to not call if vget() ptr was not used // error if N > maxchunk void vgot(int n) { if (n > maxchunk) errorflag = 1; ndatum += n; nchunk++; index += n; } // clear all pages, without freeing any memory void reset() { ndatum = nchunk = 0; index = ipage = 0; page = pages[ipage]; } // return total size of allocated pages int size() const { return npage*pagesize*sizeof(T); } // return error status int status() const { return errorflag; } private: T **pages; // list of allocated pages T *page; // ptr to current page int npage; // # of allocated pages int ipage; // index of current page int index; // current index on current page int maxchunk; // max # of datums in one requested chunk int pagesize; // # of datums in one page, default = 1024 int pagedelta; // # of pages to allocate at once, default = 1 int errorflag; // flag > 0 if error has occurred // 1 = chunk size exceeded maxchunk // 2 = memory allocation error void allocate() { npage += pagedelta; pages = (T **) realloc(pages,npage*sizeof(T *)); if (!pages) { errorflag = 2; return; } for (int i = npage-pagedelta; i < npage; i++) { #if defined(LAMMPS_MEMALIGN) void *ptr; if (posix_memalign(&ptr, LAMMPS_MEMALIGN, pagesize*sizeof(T))) errorflag = 2; pages[i] = (T *) ptr; #else pages[i] = (T *) malloc(pagesize*sizeof(T)); if (!pages[i]) errorflag = 2; #endif } } }; } #endif