// clang-format off /* ---------------------------------------------------------------------- LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator https://www.lammps.org/, Sandia National Laboratories LAMMPS development team: developers@lammps.org Copyright (2003) Sandia Corporation. Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains certain rights in this software. This software is distributed under the GNU General Public License. See the README file in the top-level LAMMPS directory. ------------------------------------------------------------------------- */ #include "compute_sph_e_atom.h" #include "atom.h" #include "comm.h" #include "error.h" #include "memory.h" #include "modify.h" #include "update.h" #include using namespace LAMMPS_NS; /* ---------------------------------------------------------------------- */ ComputeSPHEAtom::ComputeSPHEAtom(LAMMPS *lmp, int narg, char **arg) : Compute(lmp, narg, arg) { if (narg != 3) error->all(FLERR,"Number of arguments for compute sph/e/atom command != 3"); if (atom->esph_flag != 1) error->all(FLERR,"Compute sph/e/atom requires atom attribute energy, e.g. in atom_style sph"); peratom_flag = 1; size_peratom_cols = 0; nmax = 0; evector = nullptr; } /* ---------------------------------------------------------------------- */ ComputeSPHEAtom::~ComputeSPHEAtom() { memory->sfree(evector); } /* ---------------------------------------------------------------------- */ void ComputeSPHEAtom::init() { int count = 0; for (int i = 0; i < modify->ncompute; i++) if (strcmp(modify->compute[i]->style,"sph/e/atom") == 0) count++; if (count > 1 && comm->me == 0) error->warning(FLERR,"More than one compute sph/e/atom"); } /* ---------------------------------------------------------------------- */ void ComputeSPHEAtom::compute_peratom() { invoked_peratom = update->ntimestep; // grow evector array if necessary if (atom->nmax > nmax) { memory->sfree(evector); nmax = atom->nmax; evector = (double *) memory->smalloc(nmax*sizeof(double),"evector/atom:evector"); vector_atom = evector; } double *esph = atom->esph; int *mask = atom->mask; int nlocal = atom->nlocal; for (int i = 0; i < nlocal; i++) { if (mask[i] & groupbit) { evector[i] = esph[i]; } else { evector[i] = 0.0; } } } /* ---------------------------------------------------------------------- memory usage of local atom-based array ------------------------------------------------------------------------- */ double ComputeSPHEAtom::memory_usage() { double bytes = (double)nmax * sizeof(double); return bytes; }