LAMMPS (22 Aug 2018) # small W unit cell for use with VASP variable mode index file if "${mode} == file" then "message client md file tmp.couple" elif "${mode} == zmq" "message client md zmq localhost:5555" message client md zmq localhost:5555 variable x index 1 variable y index 1 variable z index 1 units metal atom_style atomic atom_modify sort 0 0.0 map yes read_data data.W orthogonal box = (0 0 0) to (3.16 3.16 3.16) 1 by 1 by 2 MPI processor grid reading atoms ... 2 atoms mass 1 183.85 replicate $x $y $z replicate 1 $y $z replicate 1 1 $z replicate 1 1 1 orthogonal box = (0 0 0) to (3.16 3.16 3.16) 1 by 1 by 2 MPI processor grid 2 atoms Time spent = 0.000148058 secs velocity all create 300.0 87287 loop geom neighbor 0.3 bin neigh_modify delay 0 every 10 check no fix 1 all nve fix 2 all client/md fix_modify 2 energy yes thermo 1 run 3 Per MPI rank memory allocation (min/avg/max) = 1.8 | 1.8 | 1.8 Mbytes Step Temp E_pair E_mol TotEng Press 0 300 0 0 -48.030793 -78159.503 1 298.24318 0 0 -48.03102 -78167.19 2 296.85584 0 0 -48.031199 -78173.26 3 295.83795 0 0 -48.031331 -78177.714 Loop time of 0.457491 on 2 procs for 3 steps with 2 atoms Performance: 0.567 ns/day, 42.360 hours/ns, 6.558 timesteps/s 50.1% CPU use with 2 MPI tasks x no OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 0 | 0 | 0 | 0.0 | 0.00 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 1.3828e-05 | 2.9922e-05 | 4.6015e-05 | 0.0 | 0.01 Output | 7.5817e-05 | 9.3937e-05 | 0.00011206 | 0.0 | 0.02 Modify | 0.45735 | 0.45736 | 0.45736 | 0.0 | 99.97 Other | | 1.204e-05 | | | 0.00 Nlocal: 1 ave 1 max 1 min Histogram: 2 0 0 0 0 0 0 0 0 0 Nghost: 4 ave 4 max 4 min Histogram: 2 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 2 0 0 0 0 0 0 0 0 0 Total # of neighbors = 0 Ave neighs/atom = 0 Neighbor list builds = 0 Dangerous builds not checked Total wall time: 0:01:21