// unit tests for checking and changing simulation properties through the library interface #include "lammps.h" #include "library.h" #include "lmptype.h" #include #include "gmock/gmock.h" #include "gtest/gtest.h" #include "test_main.h" #define STRINGIFY(val) XSTR(val) #define XSTR(val) #val using ::LAMMPS_NS::tagint; using ::testing::HasSubstr; using ::testing::StartsWith; using ::testing::StrEq; class LibraryProperties : public ::testing::Test { protected: void *lmp; std::string INPUT_DIR = STRINGIFY(TEST_INPUT_FOLDER); LibraryProperties(){}; ~LibraryProperties() override{}; void SetUp() override { const char *args[] = {"LAMMPS_test", "-log", "none", "-echo", "screen", "-nocite", "-var", "input_dir", STRINGIFY(TEST_INPUT_FOLDER)}; char **argv = (char **)args; int argc = sizeof(args) / sizeof(char *); ::testing::internal::CaptureStdout(); lmp = lammps_open_no_mpi(argc, argv, NULL); std::string output = ::testing::internal::GetCapturedStdout(); if (verbose) std::cout << output; EXPECT_THAT(output, StartsWith("LAMMPS (")); } void TearDown() override { ::testing::internal::CaptureStdout(); lammps_close(lmp); std::string output = ::testing::internal::GetCapturedStdout(); EXPECT_THAT(output, HasSubstr("Total wall time:")); if (verbose) std::cout << output; lmp = nullptr; } }; TEST_F(LibraryProperties, version) { EXPECT_LT(20200917, lammps_version(lmp)); }; TEST_F(LibraryProperties, memory_usage) { double meminfo[3]; lammps_memory_usage(lmp, meminfo); EXPECT_GT(meminfo[0], 0.0); #if defined(__linux__) || defined(_WIN32) EXPECT_GE(meminfo[1], 0.0); #endif EXPECT_GT(meminfo[2], 0.0); }; TEST_F(LibraryProperties, get_mpi_comm) { int f_comm = lammps_get_mpi_comm(lmp); if (lammps_config_has_mpi_support()) EXPECT_GE(f_comm, 0); else EXPECT_EQ(f_comm, -1); }; TEST_F(LibraryProperties, natoms) { if (!lammps_has_style(lmp, "atom", "full")) GTEST_SKIP(); std::string input = INPUT_DIR + PATH_SEP + "in.fourmol"; if (!verbose) ::testing::internal::CaptureStdout(); lammps_file(lmp, input.c_str()); if (!verbose) ::testing::internal::GetCapturedStdout(); EXPECT_EQ(lammps_get_natoms(lmp), 29); }; TEST_F(LibraryProperties, thermo) { if (!lammps_has_style(lmp, "atom", "full")) GTEST_SKIP(); std::string input = INPUT_DIR + PATH_SEP + "in.fourmol"; ::testing::internal::CaptureStdout(); lammps_file(lmp, input.c_str()); lammps_command(lmp, "run 2 post no"); std::string output = ::testing::internal::GetCapturedStdout(); if (verbose) std::cout << output; EXPECT_EQ(lammps_get_thermo(lmp, "step"), 2); EXPECT_EQ(lammps_get_thermo(lmp, "atoms"), 29); EXPECT_DOUBLE_EQ(lammps_get_thermo(lmp, "vol"), 3375.0); EXPECT_DOUBLE_EQ(lammps_get_thermo(lmp, "density"), 0.12211250945013695); EXPECT_DOUBLE_EQ(lammps_get_thermo(lmp, "cellalpha"), 90.0); }; TEST_F(LibraryProperties, box) { if (!lammps_has_style(lmp, "atom", "full")) GTEST_SKIP(); std::string input = INPUT_DIR + PATH_SEP + "in.fourmol"; ::testing::internal::CaptureStdout(); lammps_file(lmp, input.c_str()); lammps_command(lmp, "run 2 post no"); std::string output = ::testing::internal::GetCapturedStdout(); if (verbose) std::cout << output; double boxlo[3], boxhi[3], xy, yz, xz; int pflags[3], boxflag; lammps_extract_box(lmp, boxlo, boxhi, &xy, &yz, &xz, pflags, &boxflag); EXPECT_DOUBLE_EQ(boxlo[0], -6.024572); EXPECT_DOUBLE_EQ(boxlo[1], -7.692866); EXPECT_DOUBLE_EQ(boxlo[2], -8.086924); EXPECT_DOUBLE_EQ(boxhi[0], 8.975428); EXPECT_DOUBLE_EQ(boxhi[1], 7.307134); EXPECT_DOUBLE_EQ(boxhi[2], 6.913076); EXPECT_DOUBLE_EQ(xy, 0.0); EXPECT_DOUBLE_EQ(yz, 0.0); EXPECT_DOUBLE_EQ(xz, 0.0); EXPECT_EQ(pflags[0], 1); EXPECT_EQ(pflags[1], 1); EXPECT_EQ(pflags[2], 1); EXPECT_EQ(boxflag, 0); EXPECT_DOUBLE_EQ(lammps_get_thermo(lmp, "vol"), 3375.0); EXPECT_DOUBLE_EQ(lammps_get_thermo(lmp, "density"), 0.12211250945013695); EXPECT_DOUBLE_EQ(lammps_get_thermo(lmp, "cellalpha"), 90.0); if (!verbose) ::testing::internal::CaptureStdout(); lammps_command(lmp, "change_box all boundary p p f triclinic xy final 0.5"); lammps_command(lmp, "fix box all box/relax x 0.0 y 0.0"); if (!verbose) ::testing::internal::GetCapturedStdout(); lammps_extract_box(lmp, boxlo, boxhi, &xy, &yz, &xz, pflags, &boxflag); EXPECT_DOUBLE_EQ(boxlo[0], -6.024572); EXPECT_DOUBLE_EQ(boxlo[1], -7.692866); EXPECT_DOUBLE_EQ(boxlo[2], -8.086924); EXPECT_DOUBLE_EQ(boxhi[0], 8.975428); EXPECT_DOUBLE_EQ(boxhi[1], 7.307134); EXPECT_DOUBLE_EQ(boxhi[2], 6.913076); EXPECT_DOUBLE_EQ(xy, 0.5); EXPECT_DOUBLE_EQ(yz, 0.0); EXPECT_DOUBLE_EQ(xz, 0.0); EXPECT_EQ(pflags[0], 1); EXPECT_EQ(pflags[1], 1); EXPECT_EQ(pflags[2], 0); EXPECT_EQ(boxflag, 1); EXPECT_DOUBLE_EQ(lammps_get_thermo(lmp, "vol"), 3375.0); EXPECT_DOUBLE_EQ(lammps_get_thermo(lmp, "density"), 0.12211250945013695); EXPECT_DOUBLE_EQ(lammps_get_thermo(lmp, "cellalpha"), 90.0); EXPECT_DOUBLE_EQ(lammps_get_thermo(lmp, "cellbeta"), 90.0); EXPECT_DOUBLE_EQ(lammps_get_thermo(lmp, "cellgamma"), 88.090847567003621); boxlo[0] = -6.1; boxhi[1] = 7.3; xy = 0.1; lammps_reset_box(lmp, boxlo, boxhi, xy, yz, xz); lammps_extract_box(lmp, boxlo, boxhi, &xy, &yz, &xz, pflags, &boxflag); EXPECT_DOUBLE_EQ(boxlo[0], -6.1); EXPECT_DOUBLE_EQ(boxlo[1], -7.692866); EXPECT_DOUBLE_EQ(boxlo[2], -8.086924); EXPECT_DOUBLE_EQ(boxhi[0], 8.975428); EXPECT_DOUBLE_EQ(boxhi[1], 7.3); EXPECT_DOUBLE_EQ(boxhi[2], 6.913076); EXPECT_DOUBLE_EQ(xy, 0.1); EXPECT_DOUBLE_EQ(yz, 0.0); EXPECT_DOUBLE_EQ(xz, 0.0); EXPECT_EQ(pflags[0], 1); EXPECT_EQ(pflags[1], 1); EXPECT_EQ(pflags[2], 0); EXPECT_EQ(boxflag, 1); EXPECT_DOUBLE_EQ(lammps_get_thermo(lmp, "vol"), 3390.3580784497199); EXPECT_DOUBLE_EQ(lammps_get_thermo(lmp, "cellgamma"), 89.61785205109274); }; TEST_F(LibraryProperties, setting) { #if defined(LAMMPS_SMALLSMALL) EXPECT_EQ(lammps_extract_setting(lmp, "bigint"), 4); #else EXPECT_EQ(lammps_extract_setting(lmp, "bigint"), 8); #endif #if defined(LAMMPS_BIGBIG) EXPECT_EQ(lammps_extract_setting(lmp, "tagint"), 8); EXPECT_EQ(lammps_extract_setting(lmp, "imageint"), 8); #else EXPECT_EQ(lammps_extract_setting(lmp, "tagint"), 4); EXPECT_EQ(lammps_extract_setting(lmp, "imageint"), 4); #endif EXPECT_EQ(lammps_extract_setting(lmp, "box_exist"), 0); if (!verbose) ::testing::internal::CaptureStdout(); lammps_command(lmp, "dimension 2"); if (!verbose) ::testing::internal::GetCapturedStdout(); EXPECT_EQ(lammps_extract_setting(lmp, "dimension"), 2); if (!verbose) ::testing::internal::CaptureStdout(); lammps_command(lmp, "dimension 3"); if (!verbose) ::testing::internal::GetCapturedStdout(); EXPECT_EQ(lammps_extract_setting(lmp, "world_size"), 1); EXPECT_EQ(lammps_extract_setting(lmp, "world_rank"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "universe_size"), 1); EXPECT_EQ(lammps_extract_setting(lmp, "universe_rank"), 0); EXPECT_GT(lammps_extract_setting(lmp, "nthreads"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "newton_pair"), 1); EXPECT_EQ(lammps_extract_setting(lmp, "newton_bond"), 1); if (!verbose) ::testing::internal::CaptureStdout(); lammps_command(lmp, "newton off"); if (!verbose) ::testing::internal::GetCapturedStdout(); EXPECT_EQ(lammps_extract_setting(lmp, "newton_pair"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "newton_bond"), 0); if (!verbose) ::testing::internal::CaptureStdout(); lammps_command(lmp, "newton on off"); if (!verbose) ::testing::internal::GetCapturedStdout(); EXPECT_EQ(lammps_extract_setting(lmp, "newton_pair"), 1); EXPECT_EQ(lammps_extract_setting(lmp, "newton_bond"), 0); if (!verbose) ::testing::internal::CaptureStdout(); lammps_command(lmp, "newton off on"); if (!verbose) ::testing::internal::GetCapturedStdout(); EXPECT_EQ(lammps_extract_setting(lmp, "newton_pair"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "newton_bond"), 1); if (!verbose) ::testing::internal::CaptureStdout(); lammps_command(lmp, "newton on"); if (!verbose) ::testing::internal::GetCapturedStdout(); EXPECT_EQ(lammps_extract_setting(lmp, "newton_pair"), 1); EXPECT_EQ(lammps_extract_setting(lmp, "newton_bond"), 1); EXPECT_EQ(lammps_extract_setting(lmp, "ntypes"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "nbondtypes"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "nangletypes"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "ndihedraltypes"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "nimpropertypes"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "molecule_flag"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "q_flag"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "mu_flag"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "rmass_flag"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "UNKNOWN"), -1); if (lammps_has_style(lmp, "atom", "full")) { std::string input = INPUT_DIR + PATH_SEP + "in.fourmol"; if (!verbose) ::testing::internal::CaptureStdout(); lammps_file(lmp, input.c_str()); lammps_command(lmp, "run 2 post no"); if (!verbose) ::testing::internal::GetCapturedStdout(); EXPECT_EQ(lammps_extract_setting(lmp, "triclinic"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "box_exist"), 1); EXPECT_EQ(lammps_extract_setting(lmp, "dimension"), 3); EXPECT_EQ(lammps_extract_setting(lmp, "nlocal"), 29); EXPECT_EQ(lammps_extract_setting(lmp, "nghost"), 518); EXPECT_EQ(lammps_extract_setting(lmp, "nall"), 547); EXPECT_EQ(lammps_extract_setting(lmp, "nmax"), 16384); EXPECT_EQ(lammps_extract_setting(lmp, "ntypes"), 5); EXPECT_EQ(lammps_extract_setting(lmp, "nbondtypes"), 5); EXPECT_EQ(lammps_extract_setting(lmp, "nangletypes"), 4); EXPECT_EQ(lammps_extract_setting(lmp, "ndihedraltypes"), 5); EXPECT_EQ(lammps_extract_setting(lmp, "nimpropertypes"), 2); EXPECT_EQ(lammps_extract_setting(lmp, "molecule_flag"), 1); EXPECT_EQ(lammps_extract_setting(lmp, "q_flag"), 1); EXPECT_EQ(lammps_extract_setting(lmp, "mu_flag"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "rmass_flag"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "radius_flag"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "sphere_flag"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "ellipsoid_flag"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "omega_flag"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "torque_flag"), 0); EXPECT_EQ(lammps_extract_setting(lmp, "angmom_flag"), 0); if (!verbose) ::testing::internal::CaptureStdout(); lammps_command(lmp, "change_box all triclinic"); lammps_command(lmp, "fix rmass all property/atom rmass ghost yes"); if (!verbose) ::testing::internal::GetCapturedStdout(); EXPECT_EQ(lammps_extract_setting(lmp, "triclinic"), 1); EXPECT_EQ(lammps_extract_setting(lmp, "rmass_flag"), 1); } }; TEST_F(LibraryProperties, global) { if (!lammps_has_style(lmp, "atom", "full")) GTEST_SKIP(); std::string input = INPUT_DIR + PATH_SEP + "in.fourmol"; if (!verbose) ::testing::internal::CaptureStdout(); lammps_file(lmp, input.c_str()); lammps_command(lmp, "run 2 post no"); if (!verbose) ::testing::internal::GetCapturedStdout(); EXPECT_EQ(lammps_extract_global_datatype(lmp, "UNKNOWN"), -1); EXPECT_EQ(lammps_extract_global(lmp, "UNKNOWN"), nullptr); EXPECT_EQ(lammps_extract_global_datatype(lmp, "units"), LAMMPS_STRING); char *c_ptr = (char *)lammps_extract_global(lmp, "units"); EXPECT_THAT(c_ptr, StrEq("real")); #if defined(LAMMPS_SMALLSMALL) EXPECT_EQ(lammps_extract_global_datatype(lmp, "ntimestep"), LAMMPS_INT); int *i_ptr = (int *)lammps_extract_global(lmp, "ntimestep"); EXPECT_EQ((*i_ptr), 2); #else EXPECT_EQ(lammps_extract_global_datatype(lmp, "ntimestep"), LAMMPS_INT64); int64_t *b_ptr = (int64_t *)lammps_extract_global(lmp, "ntimestep"); EXPECT_EQ((*b_ptr), 2); #endif EXPECT_EQ(lammps_extract_global_datatype(lmp, "dt"), LAMMPS_DOUBLE); double *d_ptr = (double *)lammps_extract_global(lmp, "dt"); EXPECT_DOUBLE_EQ((*d_ptr), 0.1); }; class AtomProperties : public ::testing::Test { protected: void *lmp; AtomProperties(){}; ~AtomProperties() override{}; void SetUp() override { const char *args[] = {"LAMMPS_test", "-log", "none", "-echo", "screen", "-nocite"}; char **argv = (char **)args; int argc = sizeof(args) / sizeof(char *); ::testing::internal::CaptureStdout(); lmp = lammps_open_no_mpi(argc, argv, NULL); std::string output = ::testing::internal::GetCapturedStdout(); if (verbose) std::cout << output; EXPECT_THAT(output, StartsWith("LAMMPS (")); ::testing::internal::CaptureStdout(); lammps_command(lmp, "region box block 0 2 0 2 0 2"); lammps_command(lmp, "create_box 1 box"); lammps_command(lmp, "mass 1 3.0"); lammps_command(lmp, "create_atoms 1 single 1.0 1.0 1.5"); lammps_command(lmp, "create_atoms 1 single 0.2 0.1 0.1"); output = ::testing::internal::GetCapturedStdout(); if (verbose) std::cout << output; } void TearDown() override { ::testing::internal::CaptureStdout(); lammps_close(lmp); std::string output = ::testing::internal::GetCapturedStdout(); EXPECT_THAT(output, HasSubstr("Total wall time:")); if (verbose) std::cout << output; lmp = nullptr; } }; TEST_F(AtomProperties, invalid) { ASSERT_EQ(lammps_extract_atom(lmp, "UNKNOWN"), nullptr); } TEST_F(AtomProperties, mass) { EXPECT_EQ(lammps_extract_atom_datatype(lmp, "mass"), LAMMPS_DOUBLE); double *mass = (double *)lammps_extract_atom(lmp, "mass"); ASSERT_NE(mass, nullptr); ASSERT_DOUBLE_EQ(mass[1], 3.0); } TEST_F(AtomProperties, id) { EXPECT_EQ(lammps_extract_atom_datatype(lmp, "id"), LAMMPS_TAGINT); tagint *id = (tagint *)lammps_extract_atom(lmp, "id"); ASSERT_NE(id, nullptr); ASSERT_EQ(id[0], 1); ASSERT_EQ(id[1], 2); } TEST_F(AtomProperties, type) { EXPECT_EQ(lammps_extract_atom_datatype(lmp, "type"), LAMMPS_INT); int *type = (int *)lammps_extract_atom(lmp, "type"); ASSERT_NE(type, nullptr); ASSERT_EQ(type[0], 1); ASSERT_EQ(type[1], 1); } TEST_F(AtomProperties, position) { EXPECT_EQ(lammps_extract_atom_datatype(lmp, "x"), LAMMPS_DOUBLE_2D); double **x = (double **)lammps_extract_atom(lmp, "x"); ASSERT_NE(x, nullptr); EXPECT_DOUBLE_EQ(x[0][0], 1.0); EXPECT_DOUBLE_EQ(x[0][1], 1.0); EXPECT_DOUBLE_EQ(x[0][2], 1.5); EXPECT_DOUBLE_EQ(x[1][0], 0.2); EXPECT_DOUBLE_EQ(x[1][1], 0.1); EXPECT_DOUBLE_EQ(x[1][2], 0.1); }