/* ---------------------------------------------------------------------- LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator http://lammps.sandia.gov, Sandia National Laboratories Steve Plimpton, sjplimp@sandia.gov This software is distributed under the GNU General Public License. See the README file in the top-level LAMMPS directory. ------------------------------------------------------------------------- */ /* ---------------------------------------------------------------------- Contributing author: Axel Kohlmeyer (Temple U) ------------------------------------------------------------------------- */ #include #include "pair_zbl_omp.h" #include "atom.h" #include "comm.h" #include "force.h" #include "neighbor.h" #include "neigh_list.h" #include "suffix.h" using namespace LAMMPS_NS; using namespace PairZBLConstants; /* ---------------------------------------------------------------------- */ PairZBLOMP::PairZBLOMP(LAMMPS *lmp) : PairZBL(lmp), ThrOMP(lmp, THR_PAIR) { suffix_flag |= Suffix::OMP; respa_enable = 0; } /* ---------------------------------------------------------------------- */ void PairZBLOMP::compute(int eflag, int vflag) { if (eflag || vflag) { ev_setup(eflag,vflag); } else evflag = vflag_fdotr = 0; const int nall = atom->nlocal + atom->nghost; const int nthreads = comm->nthreads; const int inum = list->inum; #if defined(_OPENMP) #pragma omp parallel default(none) shared(eflag,vflag) #endif { int ifrom, ito, tid; loop_setup_thr(ifrom, ito, tid, inum, nthreads); ThrData *thr = fix->get_thr(tid); thr->timer(Timer::START); ev_setup_thr(eflag, vflag, nall, eatom, vatom, thr); if (evflag) { if (eflag) { if (force->newton_pair) eval<1,1,1>(ifrom, ito, thr); else eval<1,1,0>(ifrom, ito, thr); } else { if (force->newton_pair) eval<1,0,1>(ifrom, ito, thr); else eval<1,0,0>(ifrom, ito, thr); } } else { if (force->newton_pair) eval<0,0,1>(ifrom, ito, thr); else eval<0,0,0>(ifrom, ito, thr); } thr->timer(Timer::PAIR); reduce_thr(this, eflag, vflag, thr); } // end of omp parallel region } template void PairZBLOMP::eval(int iifrom, int iito, ThrData * const thr) { const dbl3_t * _noalias const x = (dbl3_t *) atom->x[0]; dbl3_t * _noalias const f = (dbl3_t *) thr->get_f()[0]; const int * _noalias const type = atom->type; const int * _noalias const ilist = list->ilist; const int * _noalias const numneigh = list->numneigh; const int * const * const firstneigh = list->firstneigh; double xtmp,ytmp,ztmp,delx,dely,delz,fxtmp,fytmp,fztmp; double rsq,t,fswitch,eswitch,evdwl,fpair; const int nlocal = atom->nlocal; int j,jj,jnum,jtype; evdwl = 0.0; // loop over neighbors of my atoms for (int ii = iifrom; ii < iito; ++ii) { const int i = ilist[ii]; const int itype = type[i]; const int * _noalias const jlist = firstneigh[i]; const double * _noalias const sw1i = sw1[itype]; const double * _noalias const sw2i = sw2[itype]; const double * _noalias const sw3i = sw3[itype]; const double * _noalias const sw4i = sw4[itype]; const double * _noalias const sw5i = sw5[itype]; xtmp = x[i].x; ytmp = x[i].y; ztmp = x[i].z; jnum = numneigh[i]; fxtmp=fytmp=fztmp=0.0; for (jj = 0; jj < jnum; jj++) { j = jlist[jj]; j &= NEIGHMASK; delx = xtmp - x[j].x; dely = ytmp - x[j].y; delz = ztmp - x[j].z; rsq = delx*delx + dely*dely + delz*delz; jtype = type[j]; if (rsq < cut_globalsq) { const double r = sqrt(rsq); fpair = dzbldr(r, itype, jtype); if (r > cut_inner) { t = r - cut_inner; fswitch = t*t * (sw1i[jtype] + sw2i[jtype]*t); fpair += fswitch; } fpair *= -1.0/r; fxtmp += delx*fpair; fytmp += dely*fpair; fztmp += delz*fpair; if (NEWTON_PAIR || j < nlocal) { f[j].x -= delx*fpair; f[j].y -= dely*fpair; f[j].z -= delz*fpair; } if (EFLAG) { evdwl = e_zbl(r, itype, jtype); evdwl += sw5i[jtype]; if (r > cut_inner) { eswitch = t*t*t * (sw3i[jtype] + sw4i[jtype]*t); evdwl += eswitch; } } if (EVFLAG) ev_tally_thr(this,i,j,nlocal,NEWTON_PAIR, evdwl,0.0,fpair,delx,dely,delz,thr); } } f[i].x += fxtmp; f[i].y += fytmp; f[i].z += fztmp; } } /* ---------------------------------------------------------------------- */ double PairZBLOMP::memory_usage() { double bytes = memory_usage_thr(); bytes += PairZBL::memory_usage(); return bytes; }