variable sname index h2bulk.ang units real newton on boundary p p p atom_style electron read_data data.${sname} pair_style eff/cut 16.207559818252903 limit/eradius pressure/evirials pair_coeff * * neigh_modify one 10000 page 100000 comm_modify vel yes compute peratom all stress/atom NULL compute p all reduce sum c_peratom[1] c_peratom[2] c_peratom[3] variable press equal -(c_p[1]+c_p[2]+c_p[3])/(3*vol) compute effTemp all temp/eff compute effPress all pressure effTemp compute energies all pair eff/cut variable eke equal c_energies[1] variable epauli equal c_energies[2] variable ecoul equal c_energies[3] variable erres equal c_energies[4] thermo 10 thermo_style custom step etotal pe ke v_eke v_epauli v_ecoul v_erres press v_press temp thermo_modify temp effTemp press effPress flush yes # structure minimization min_style cg minimize 0 1.0e-4 10 10 timestep 0.001 velocity all create 20000.0 4928459 rot yes mom yes dist gaussian # nve fix 1 all nve/eff #fix 2 all imd 8888 trate 1 unwrap on nowait on compute peatom all pe/atom compute keatom all ke/atom/eff dump 2 all xyz 1000 ${sname}.nve.xyz compute 1 all property/atom spin eradius dump 3 all custom 1000 ${sname}.nve.lammpstrj id type x y z c_1[1] c_1[2] c_peatom c_keatom run 10 unfix 1 #unfix 2 undump 2 undump 3