/* -*- c++ -*- ---------------------------------------------------------- LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator https://www.lammps.org/, Sandia National Laboratories Steve Plimpton, sjplimp@sandia.gov Copyright (2003) Sandia Corporation. Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains certain rights in this software. This software is distributed under the GNU General Public License. See the README file in the top-level LAMMPS directory. ------------------------------------------------------------------------- */ #ifdef COMMAND_CLASS // clang-format off CommandStyle(create_bonds,CreateBonds); // clang-format on #else #ifndef LMP_CREATE_BONDS_H #define LMP_CREATE_BONDS_H #include "command.h" namespace LAMMPS_NS { class CreateBonds : public Command { public: CreateBonds(class LAMMPS *); void command(int, char **) override; private: int igroup, group1bit, group2bit; int btype, atype, dtype; tagint batom1, batom2, aatom1, aatom2, aatom3, datom1, datom2, datom3, datom4; double rmin, rmax; void many(); void single_bond(); void single_angle(); void single_dihedral(); void single_improper(); }; } // namespace LAMMPS_NS #endif #endif /* ERROR/WARNING messages: E: Create_bonds command before simulation box is defined Self-explanatory. E: Cannot use create_bonds unless atoms have IDs This command requires a mapping from global atom IDs to local atoms, but the atoms that have been defined have no IDs. E: Cannot use create_bonds with non-molecular system Self-explanatory. E: Illegal ... command Self-explanatory. Check the input script syntax and compare to the documentation for the command. You can use -echo screen as a command-line option when running LAMMPS to see the offending line. E: Cannot find create_bonds group ID Self-explanatory. E: Invalid bond type in create_bonds command Self-explanatory. E: Cannot use special no with create_bonds many UNDOCUMENTED E: Invalid angle type in create_bonds command UNDOCUMENTED E: Invalid dihedral type in create_bonds command UNDOCUMENTED E: Invalid improper type in create_bonds command UNDOCUMENTED E: Create_bonds requires a pair style be defined Self-explanatory. E: Create_bonds max distance > neighbor cutoff Can only create bonds for atom pairs that will be in neighbor list. W: Create_bonds max distance > minimum neighbor cutoff This means atom pairs for some atom types may not be in the neighbor list and thus no bond can be created between them. E: Create_bonds command requires special_bonds 1-2 weights be 0.0 This is so that atom pairs that are already bonded to not appear in the neighbor list. E: Create_bonds command requires no kspace_style be defined This is so that atom pairs that are already bonded to not appear in the neighbor list. E: New bond exceeded bonds per atom in create_bonds See the read_data command for info on setting the "extra bond per atom" header value to allow for additional bonds to be formed. E: Create_bonds single/bond atoms do not exist UNDOCUMENTED E: Create_bonds single/angle atoms do not exist UNDOCUMENTED E: New angle exceeded angles per atom in create_bonds UNDOCUMENTED E: Create_bonds single/dihedral atoms do not exist UNDOCUMENTED E: New dihedral exceeded dihedrals per atom in create_bonds UNDOCUMENTED E: Create_bonds single/improper atoms do not exist UNDOCUMENTED E: New improper exceeded impropers per atom in create_bonds UNDOCUMENTED */