165 lines
4.8 KiB
Python
165 lines
4.8 KiB
Python
#!/usr/bin/env python3
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# Utility for detecting incorrect LAMMPS homepage URLs
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#
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# Written by Richard Berger (Temple University)
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from __future__ import print_function
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import sys
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if sys.version_info.major < 3:
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sys.exit('This script must be run with Python 3.x')
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import os
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import glob
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import re
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import yaml
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import argparse
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import shutil
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DEFAULT_CONFIG = """
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recursive: true
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include:
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- cmake/**
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- doc
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- doc/src/**
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- python
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- src/**
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- tools/coding_standard
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patterns:
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- "*.c"
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- "*.cmake"
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- "*.cpp"
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- "*.h"
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- "*.md"
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- "*.py"
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- "*.rst"
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- "*.sh"
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- ".gitignore"
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- "README"
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- "requirements.txt"
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"""
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def check_homepage(f):
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pattern = re.compile(r'.*lammps.sandia.gov.*') # lgtm [py/incomplete-hostname-regexp]
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lineno = 1
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errors = set()
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for line in f:
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if pattern.match(line):
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errors.add(lineno)
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lineno += 1
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return errors
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def check_file(path):
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if path.find('homepage.py') >= 0: return { 'homepage_errors' : '' }
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encoding = 'UTF-8'
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homepage_errors = set()
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try:
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with open(path, 'r') as f:
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homepage_errors = check_homepage(f)
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except UnicodeDecodeError:
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encoding = 'ISO-8859-1'
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try:
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with open(path, 'r', encoding=encoding) as f:
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homepage_errors = check_homepage(f)
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except Exception:
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encoding = 'unknown'
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return {
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'homepage_errors': homepage_errors,
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'encoding': encoding
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}
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def fix_file(path, check_result):
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if path.find('homepage.py') >= 0: return
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newfile = path + ".modified"
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with open(newfile, 'w', encoding='UTF-8') as out:
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with open(path, 'r', encoding=check_result['encoding']) as src:
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for line in src:
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newline = line.replace("lammps.sandia.gov/doc/","docs.lammps.org/")
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newline = newline.replace("http://lammps.sandia.gov/","https://www.lammps.org/")
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newline = newline.replace("http://lammps.sandia.gov,","https://www.lammps.org/")
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newline = newline.replace("lammps.sandia.gov","www.lammps.org")
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newline = newline.replace("http://www.lammps.org","https://www.lammps.org")
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print(newline, end='', file=out)
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shutil.copymode(path, newfile)
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shutil.move(newfile, path)
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def check_folder(directory, config, fix=False, verbose=False):
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success = True
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files = []
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for base_path in config['include']:
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for pattern in config['patterns']:
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path = os.path.join(directory, base_path, pattern)
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files += glob.glob(path, recursive=config['recursive'])
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for f in files:
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path = os.path.normpath(f)
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if verbose:
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print("Checking file:", path)
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result = check_file(path)
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has_resolvable_errors = False
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for lineno in result['homepage_errors']:
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print("[Error] Incorrect LAMMPS homepage @ {}:{}".format(path, lineno))
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has_resolvable_errors = True
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if has_resolvable_errors:
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if fix:
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print("Applying automatic fixes to file:", path)
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fix_file(path, result)
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else:
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success = False
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return success
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def main():
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parser = argparse.ArgumentParser(description='Utility for detecting and fixing whitespace issues in LAMMPS')
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parser.add_argument('-c', '--config', metavar='CONFIG_FILE', help='location of a optional configuration file')
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parser.add_argument('-f', '--fix', action='store_true', help='automatically fix URLs')
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parser.add_argument('-v', '--verbose', action='store_true', help='verbose output')
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parser.add_argument('DIRECTORY', help='directory (or file) that should be checked')
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args = parser.parse_args()
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lammpsdir = os.path.abspath(os.path.expanduser(args.DIRECTORY))
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if args.config:
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with open(args.config, 'r') as cfile:
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config = yaml.load(cfile, Loader=yaml.FullLoader)
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else:
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config = yaml.load(DEFAULT_CONFIG, Loader=yaml.FullLoader)
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if os.path.isdir(lammpsdir):
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if not check_folder(lammpsdir, config, args.fix, args.verbose):
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sys.exit(1)
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else:
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success = True
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path = os.path.normpath(lammpsdir)
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if args.verbose:
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print("Checking file:", path)
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result = check_file(path)
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has_resolvable_errors = False
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for lineno in result['homepage_errors']:
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print("[Error] Incorrect LAMMPS homepage @ {}:{}".format(path, lineno))
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has_resolvable_errors = True
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if has_resolvable_errors:
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if args.fix:
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print("Applying automatic fixes to file:", path)
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fix_file(path, result)
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else:
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success = False
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if not success:
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sys.exit(1)
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if __name__ == "__main__":
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main()
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