196 lines
5.9 KiB
C++
196 lines
5.9 KiB
C++
// clang-format off
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/* ----------------------------------------------------------------------
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LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator
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https://www.lammps.org/, Sandia National Laboratories
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LAMMPS development team: developers@lammps.org
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Copyright (2003) Sandia Corporation. Under the terms of Contract
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DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains
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certain rights in this software. This software is distributed under
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the GNU General Public License.
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See the README file in the top-level LAMMPS directory.
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------------------------------------------------------------------------- */
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#include "fix_dt_reset_kokkos.h"
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#include "atom_kokkos.h"
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#include "atom_masks.h"
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#include "error.h"
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#include "force.h"
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#include "input.h"
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#include "integrate.h"
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#include "kokkos_base.h"
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#include "memory_kokkos.h"
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#include "modify.h"
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#include "output.h"
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#include "pair.h"
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#include "update.h"
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using namespace LAMMPS_NS;
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using namespace FixConst;
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#define BIG 1.0e20
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/* ---------------------------------------------------------------------- */
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template<class DeviceType>
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FixDtResetKokkos<DeviceType>::FixDtResetKokkos(LAMMPS *lmp, int narg, char **arg) :
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FixDtReset(lmp, narg, arg)
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{
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kokkosable = 1;
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atomKK = (AtomKokkos *) atom;
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execution_space = ExecutionSpaceFromDevice<DeviceType>::space;
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datamask_read = EMPTY_MASK;
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datamask_modify = EMPTY_MASK;
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}
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/* ---------------------------------------------------------------------- */
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template<class DeviceType>
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void FixDtResetKokkos<DeviceType>::init()
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{
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FixDtReset::init();
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k_emax = Kokkos::DualView<double*, Kokkos::LayoutRight, DeviceType>("FixDtResetKokkos:gamma", 1);
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k_emax.h_view(0) = emax;
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k_emax.template modify<LMPHostType>();
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k_emax.template sync<DeviceType>();
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if (utils::strmatch(update->integrate_style,"^respa"))
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error->all(FLERR,"Cannot (yet) use respa with Kokkos");
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}
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/* ---------------------------------------------------------------------- */
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template<class DeviceType>
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void FixDtResetKokkos<DeviceType>::end_of_step()
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{
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atomKK->sync(execution_space, V_MASK | F_MASK | MASK_MASK | TYPE_MASK | RMASS_MASK);
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v = atomKK->k_v.view<DeviceType>();
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f = atomKK->k_f.view<DeviceType>();
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mask = atomKK->k_mask.view<DeviceType>();
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type = atomKK->k_type.view<DeviceType>();
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if (atomKK->rmass)
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rmass = atomKK->k_rmass.view<DeviceType>();
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else
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mass = atomKK->k_mass.view<DeviceType>();
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int nlocal = atom->nlocal;
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double dt;
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copymode = 1;
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if (atomKK->rmass)
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Kokkos::parallel_reduce(Kokkos::RangePolicy<DeviceType, TagFixDtResetRMass>(0,nlocal), *this, Kokkos::Min<double>(dt));
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else
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Kokkos::parallel_reduce(Kokkos::RangePolicy<DeviceType, TagFixDtResetMass>(0,nlocal), *this, Kokkos::Min<double>(dt));
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copymode = 0;
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MPI_Allreduce(MPI_IN_PLACE, &dt, 1, MPI_DOUBLE, MPI_MIN, world);
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atomKK->modified(execution_space, F_MASK);
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if (minbound) dt = MAX(dt, tmin);
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if (maxbound) dt = MIN(dt, tmax);
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// if timestep didn't change, just return
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// else reset update->dt and other classes that depend on it
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// rRESPA, pair style, fixes
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if (dt == update->dt) return;
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laststep = update->ntimestep;
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// calls to other classes that need to know timestep size changed
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// similar logic is in Input::timestep()
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update->update_time();
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update->dt = dt;
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update->dt_default = 0;
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if (force->pair) force->pair->reset_dt();
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for (int i = 0; i < modify->nfix; i++) modify->fix[i]->reset_dt();
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output->reset_dt();
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}
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/* ---------------------------------------------------------------------- */
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template<class DeviceType>
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KOKKOS_INLINE_FUNCTION
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void FixDtResetKokkos<DeviceType>::operator()(TagFixDtResetMass, const int &i, double &k_dt) const {
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double dtv, dtf, dte, dtsq;
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double vsq, fsq, massinv;
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double delx, dely, delz, delr;
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double emax = k_emax.d_view(0);
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if (mask[i] & groupbit) {
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massinv = 1.0 / mass[type[i]];
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vsq = v(i,0) * v(i,0) + v(i,1) * v(i,1) + v(i,2) * v(i,2);
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fsq = f(i,0) * f(i,0) + f(i,1) * f(i,1) + f(i,2) * f(i,2);
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dtv = dtf = dte = BIG;
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if (vsq > 0.0) dtv = xmax / sqrt(vsq);
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if (fsq > 0.0) dtf = sqrt(2.0 * xmax / (ftm2v * sqrt(fsq) * massinv));
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k_dt = MIN(dtv, dtf);
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if ((emax > 0.0) && (fsq * vsq > 0.0)) {
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dte = emax / sqrt(fsq * vsq) / sqrt(ftm2v * mvv2e);
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k_dt = MIN(dt, dte);
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}
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dtsq = k_dt * k_dt;
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delx = k_dt * v(i,0) + 0.5 * dtsq * massinv * f(i,0) * ftm2v;
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dely = k_dt * v(i,1) + 0.5 * dtsq * massinv * f(i,1) * ftm2v;
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delz = k_dt * v(i,2) + 0.5 * dtsq * massinv * f(i,2) * ftm2v;
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delr = sqrt(delx * delx + dely * dely + delz * delz);
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if (delr > xmax) k_dt *= xmax / delr;
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}
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}
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/* ---------------------------------------------------------------------- */
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template<class DeviceType>
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KOKKOS_INLINE_FUNCTION
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void FixDtResetKokkos<DeviceType>::operator()(TagFixDtResetRMass, const int &i, double &k_dt) const {
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double dtv, dtf, dte, dtsq;
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double vsq, fsq, massinv;
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double delx, dely, delz, delr;
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double emax = k_emax.d_view(0);
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if (mask[i] & groupbit) {
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massinv = 1.0 / rmass[i];
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vsq = v(i,0) * v(i,0) + v(i,1) * v(i,1) + v(i,2) * v(i,2);
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fsq = f(i,0) * f(i,0) + f(i,1) * f(i,1) + f(i,2) * f(i,2);
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dtv = dtf = dte = BIG;
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if (vsq > 0.0) dtv = xmax / sqrt(vsq);
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if (fsq > 0.0) dtf = sqrt(2.0 * xmax / (ftm2v * sqrt(fsq) * massinv));
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k_dt = MIN(dtv, dtf);
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if ((emax > 0.0) && (fsq * vsq > 0.0)) {
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dte = emax / sqrt(fsq * vsq) / sqrt(ftm2v * mvv2e);
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k_dt = MIN(dt, dte);
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}
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dtsq = k_dt * k_dt;
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delx = k_dt * v(i,0) + 0.5 * dtsq * massinv * f(i,0) * ftm2v;
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dely = k_dt * v(i,1) + 0.5 * dtsq * massinv * f(i,1) * ftm2v;
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delz = k_dt * v(i,2) + 0.5 * dtsq * massinv * f(i,2) * ftm2v;
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delr = sqrt(delx * delx + dely * dely + delz * delz);
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if (delr > xmax) k_dt *= xmax / delr;
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}
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}
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namespace LAMMPS_NS {
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template class FixDtResetKokkos<LMPDeviceType>;
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#ifdef LMP_KOKKOS_GPU
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template class FixDtResetKokkos<LMPHostType>;
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#endif
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}
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