99 lines
2.4 KiB
Plaintext
99 lines
2.4 KiB
Plaintext
.. index:: bond_style nonlinear
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bond_style nonlinear command
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============================
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bond_style nonlinear/omp command
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================================
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Syntax
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""""""
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.. parsed-literal::
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bond_style nonlinear
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Examples
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""""""""
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.. parsed-literal::
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bond_style nonlinear
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bond_coeff 2 100.0 1.1 1.4
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Description
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"""""""""""
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The *nonlinear* bond style uses the potential
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.. image:: Eqs/bond_nonlinear.jpg
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:align: center
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to define an anharmonic spring :ref:`(Rector) <Rector>` of equilibrium
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length r0 and maximum extension lamda.
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The following coefficients must be defined for each bond type via the
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:doc:`bond_coeff <bond_coeff>` command as in the example above, or in
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the data file or restart files read by the :doc:`read_data <read_data>`
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or :doc:`read_restart <read_restart>` commands:
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* epsilon (energy)
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* r0 (distance)
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* lamda (distance)
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----------
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Styles with a *cuda*\ , *gpu*\ , *intel*\ , *kk*\ , *omp*\ , or *opt* suffix are
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functionally the same as the corresponding style without the suffix.
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They have been optimized to run faster, depending on your available
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hardware, as discussed in :doc:`Section_accelerate <Section_accelerate>`
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of the manual. The accelerated styles take the same arguments and
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should produce the same results, except for round-off and precision
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issues.
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These accelerated styles are part of the USER-CUDA, GPU, USER-INTEL,
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KOKKOS, USER-OMP and OPT packages, respectively. They are only
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enabled if LAMMPS was built with those packages. See the :ref:`Making LAMMPS <start_3>` section for more info.
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You can specify the accelerated styles explicitly in your input script
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by including their suffix, or you can use the :ref:`-suffix command-line switch <start_7>` when you invoke LAMMPS, or you can
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use the :doc:`suffix <suffix>` command in your input script.
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See :doc:`Section_accelerate <Section_accelerate>` of the manual for
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more instructions on how to use the accelerated styles effectively.
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----------
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Restrictions
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""""""""""""
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This bond style can only be used if LAMMPS was built with the
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MOLECULE package (which it is by default). See the :ref:`Making LAMMPS <start_3>` section for more info on packages.
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Related commands
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""""""""""""""""
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:doc:`bond_coeff <bond_coeff>`, :doc:`delete_bonds <delete_bonds>`
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**Default:** none
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----------
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.. _Rector:
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**(Rector)** Rector, Van Swol, Henderson, Molecular Physics, 82, 1009 (1994).
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.. _lws: http://lammps.sandia.gov
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.. _ld: Manual.html
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.. _lc: Section_commands.html#comm
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