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lammps/doc/src
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sjplimp 6ac9b7a1b0 Merge pull request #482 from akohlmey/add-pair-python 
Add python pair style for implementing simple pairwise additive potentials in python
2017-05-18 11:15:58 -06:00
..
99
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
2001
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
Developer
removed leftover tex files
2016-11-16 15:39:02 -05:00
Eqs
Updated version of equations, documentation.
2017-04-28 20:22:22 -05:00
JPG
Updated images of succesful merge.
2017-01-06 19:04:26 +01:00
PDF
Upgrade to oxDNA2
2017-03-28 18:16:36 +01:00
USER/atc
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
accelerate_gpu.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
accelerate_intel.txt
neighbor list bugfix to prevent cycle in copy lists
2017-05-09 08:55:18 -06:00
accelerate_kokkos.txt
correct broken links and references in documentation
2017-05-09 17:15:07 -04:00
accelerate_omp.txt
clean up doc src
2016-10-06 13:00:46 -06:00
accelerate_opt.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
angle_charmm.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
angle_class2.txt
Updating docs for Kokkos class2
2017-02-15 13:00:33 -07:00
angle_coeff.txt
…
angle_cosine_delta.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
angle_cosine_periodic.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
angle_cosine_shift_exp.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
angle_cosine_shift.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
angle_cosine_squared.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
angle_cosine.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
angle_dipole.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
angle_fourier_simple.txt
clean up doc src
2016-10-06 13:00:46 -06:00
angle_fourier.txt
clean up doc src
2016-10-06 13:00:46 -06:00
angle_harmonic.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
angle_hybrid.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
angle_none.txt
…
angle_quartic.txt
clean up doc src
2016-10-06 13:00:46 -06:00
angle_sdk.txt
rename references to USER-CG-CMM to USER-CGSDK
2017-04-26 19:27:13 -04:00
angle_style.txt
…
angle_table.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
angle_zero.txt
…
angles.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
atom_modify.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
atom_style.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
balance.txt
change to RCB cuts in load-balancing commands, also a new option for fix halt
2017-03-10 15:55:07 -07:00
body.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
bond_class2.txt
Updating docs for Kokkos class2
2017-02-15 13:00:33 -07:00
bond_coeff.txt
…
bond_fene_expand.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
bond_fene.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
bond_harmonic_shift_cut.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
bond_harmonic_shift.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
bond_harmonic.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
bond_hybrid.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
bond_morse.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
bond_none.txt
…
bond_nonlinear.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
bond_oxdna.txt
Minor update to docu
2017-04-04 19:54:22 +01:00
bond_quartic.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
bond_style.txt
…
bond_table.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
bond_write.txt
…
bond_zero.txt
…
bonds.txt
correct broken link in html bond doc overview
2017-04-21 14:02:17 -04:00
boundary.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
box.txt
…
change_box.txt
change to RCB cuts in load-balancing commands, also a new option for fix halt
2017-03-10 15:55:07 -07:00
clear.txt
…
comm_modify.txt
collected documentation updates and corrections from LAMMPS-ICMS
2016-10-06 15:48:18 -04:00
comm_style.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
commands.txt
correct broken links and references in documentation
2017-05-09 17:15:07 -04:00
compute_ackland_atom.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_angle_local.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15352 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-07-22 22:46:14 +00:00
compute_angle.txt
…
compute_angmom_chunk.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
compute_basal_atom.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_body_local.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_bond_local.txt
Fixed small typos in doc
2016-12-07 19:37:51 -08:00
compute_bond.txt
…
compute_centro_atom.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
compute_chunk_atom.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
compute_cluster_atom.txt
fix typo in compute cluster/atom docs
2016-11-29 07:24:09 -05:00
compute_cna_atom.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
compute_com_chunk.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_com.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
compute_contact_atom.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_coord_atom.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
compute_damage_atom.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
compute_dihedral_local.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15352 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-07-22 22:46:14 +00:00
compute_dihedral.txt
…
compute_dilatation_atom.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
compute_dipole_chunk.txt
clean up doc src
2016-10-06 13:00:46 -06:00
compute_displace_atom.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
compute_dpd_atom.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
compute_dpd.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
compute_erotate_asphere.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_erotate_rigid.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_erotate_sphere_atom.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_erotate_sphere.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_event_displace.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
compute_fep.txt
doc page changes
2016-10-25 09:45:55 -06:00
compute_global_atom.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
compute_group_group.txt
patch 12Feb17 - change int to tagint for compute group/group
2017-02-13 08:40:54 -07:00
compute_gyration_chunk.txt
clean up doc src
2016-10-06 13:00:46 -06:00
compute_gyration.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_heat_flux.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
compute_hexorder_atom.txt
clean up doc src
2016-10-06 13:00:46 -06:00
compute_improper_local.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15352 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-07-22 22:46:14 +00:00
compute_improper.txt
…
compute_inertia_chunk.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
compute_ke_atom_eff.txt
clean up doc src
2016-10-06 13:00:46 -06:00
compute_ke_atom.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_ke_eff.txt
clean up doc src
2016-10-06 13:00:46 -06:00
compute_ke_rigid.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_ke.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_meso_e_atom.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_meso_rho_atom.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_meso_t_atom.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_modify.txt
fix problems with references
2017-03-27 15:01:32 -04:00
compute_msd_chunk.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
compute_msd_nongauss.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
compute_msd.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
compute_omega_chunk.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_orientorder_atom.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
compute_pair_local.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
compute_pair.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
compute_pe_atom.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
compute_pe.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_plasticity_atom.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
compute_pressure.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
compute_property_atom.txt
collected documentation updates and corrections from LAMMPS-ICMS
2016-10-06 15:48:18 -04:00
compute_property_chunk.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
compute_property_local.txt
doc page changes
2016-10-25 09:45:55 -06:00
compute_rdf.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
compute_reduce.txt
collected documentation updates and corrections from LAMMPS-ICMS
2016-10-06 15:48:18 -04:00
compute_rigid_local.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
compute_saed.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
compute_slice.txt
…
compute_smd_contact_radius.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
compute_smd_damage.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
compute_smd_hourglass_error.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
compute_smd_internal_energy.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
compute_smd_plastic_strain_rate.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
compute_smd_plastic_strain.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
compute_smd_rho.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
compute_smd_tlsph_defgrad.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
compute_smd_tlsph_dt.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
compute_smd_tlsph_num_neighs.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
compute_smd_tlsph_shape.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
compute_smd_tlsph_strain_rate.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
compute_smd_tlsph_strain.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
compute_smd_tlsph_stress.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
compute_smd_triangle_mesh_vertices.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
compute_smd_ulsph_num_neighs.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
compute_smd_ulsph_strain_rate.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
compute_smd_ulsph_strain.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
compute_smd_ulsph_stress.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
compute_smd_vol.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
compute_sna_atom.txt
new Section package and start doc pages and build scripts
2017-05-04 11:22:20 -06:00
compute_stress_atom.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
compute_tally.txt
clean up doc src
2016-10-06 13:00:46 -06:00
compute_temp_asphere.txt
First batch of spelling fixes in manual
2017-03-05 18:27:38 -05:00
compute_temp_body.txt
First batch of spelling fixes in manual
2017-03-05 18:27:38 -05:00
compute_temp_chunk.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
compute_temp_com.txt
…
compute_temp_cs.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
compute_temp_deform_eff.txt
GH changes to doc pages
2016-09-06 22:56:36 +00:00
compute_temp_deform.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15069 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-05-31 14:48:46 +00:00
compute_temp_drude.txt
clean up doc src
2016-10-06 13:00:46 -06:00
compute_temp_eff.txt
clean up doc src
2016-10-06 13:00:46 -06:00
compute_temp_partial.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_temp_profile.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
compute_temp_ramp.txt
…
compute_temp_region_eff.txt
…
compute_temp_region.txt
clean up doc src
2016-10-06 13:00:46 -06:00
compute_temp_rotate.txt
…
compute_temp_sphere.txt
collected documentation updates and corrections from LAMMPS-ICMS
2016-10-06 15:48:18 -04:00
compute_temp.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_ti.txt
clean up doc src
2016-10-06 13:00:46 -06:00
compute_torque_chunk.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_vacf.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
compute_vcm_chunk.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
compute_voronoi_atom.txt
new neigh_modify exclude option, other SNAP changes
2017-03-07 09:31:12 -07:00
compute_xrd.txt
clean up doc src
2016-10-06 13:00:46 -06:00
compute.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
computes.txt
reduce warning when processing manual with sphinx
2017-01-06 21:30:13 -05:00
create_atoms.txt
change to RCB cuts in load-balancing commands, also a new option for fix halt
2017-03-10 15:55:07 -07:00
create_bonds.txt
…
create_box.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
delete_atoms.txt
…
delete_bonds.txt
clean up doc src
2016-10-06 13:00:46 -06:00
dielectric.txt
clean up doc src
2016-10-06 13:00:46 -06:00
dihedral_charmm.txt
patch 11Apr17
2017-04-11 09:00:37 -06:00
dihedral_class2.txt
Updating docs for Kokkos class2
2017-02-15 13:00:33 -07:00
dihedral_coeff.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
dihedral_cosine_shift_exp.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
dihedral_fourier.txt
clean up doc src
2016-10-06 13:00:46 -06:00
dihedral_harmonic.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
dihedral_helix.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
dihedral_hybrid.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
dihedral_multi_harmonic.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
dihedral_nharmonic.txt
clean up doc src
2016-10-06 13:00:46 -06:00
dihedral_none.txt
…
dihedral_opls.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
dihedral_quadratic.txt
clean up doc src
2016-10-06 13:00:46 -06:00
dihedral_spherical.txt
two small doc corrections from Andrew Jewett for pair style gauss and dihedral style spherical
2017-05-12 23:27:58 -04:00
dihedral_style.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15317 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-07-15 22:33:52 +00:00
dihedral_table.txt
remove work repetitions for 'the'
2016-11-01 11:40:07 -04:00
dihedral_zero.txt
…
dihedrals.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
dimension.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
displace_atoms.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15169 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-06-14 21:25:00 +00:00
dump_h5md.txt
new Section package and start doc pages and build scripts
2017-05-04 11:22:20 -06:00
dump_image.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
dump_modify.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
dump_molfile.txt
Revert "remove reference to removed section on VMD scripts"
2017-03-22 15:12:43 -04:00
dump_netcdf.txt
new Section package and start doc pages and build scripts
2017-05-04 11:22:20 -06:00
dump_vtk.txt
new Section package and start doc pages and build scripts
2017-05-04 11:22:20 -06:00
dump.txt
new Section package and start doc pages and build scripts
2017-05-04 11:22:20 -06:00
echo.txt
…
fix_adapt_fep.txt
sync with GH
2016-09-08 20:20:32 +00:00
fix_adapt.txt
Made fix adapt work with bond_harmonic.
2017-04-04 12:35:26 -04:00
fix_addforce.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
fix_addtorque.txt
sync with GH
2016-09-08 20:20:32 +00:00
fix_append_atoms.txt
…
fix_atc.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_atom_swap.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_ave_atom.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_ave_chunk.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_ave_correlate_long.txt
collected documentation updates and corrections from LAMMPS-ICMS
2016-10-06 15:48:18 -04:00
fix_ave_correlate.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_ave_histo.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_ave_time.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_aveforce.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
fix_balance.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_bond_break.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_bond_create.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_bond_swap.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_box_relax.txt
neighbor list bugfix to prevent cycle in copy lists
2017-05-09 08:55:18 -06:00
fix_cmap.txt
new Section package and start doc pages and build scripts
2017-05-04 11:22:20 -06:00
fix_colvars.txt
Backport typo fixes that were not previously pushed to the Colvars repository
2017-03-10 09:24:46 -05:00
fix_controller.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_deform.txt
First batch of spelling fixes in manual
2017-03-05 18:27:38 -05:00
fix_deposit.txt
fix ave/chunk fixes, 2d disc option, fix_modify dynamic/dof
2017-03-23 15:31:27 -06:00
fix_dpd_energy.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_drag.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_drude_transform.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_drude.txt
…
fix_dt_reset.txt
…
fix_efield.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_ehex.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_enforce2d.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
fix_eos_cv.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_eos_table_rx.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
fix_eos_table.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
fix_evaporate.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_external.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_filter_corotate.txt
patch 17Mar17
2017-03-17 11:29:23 -06:00
fix_flow_gauss.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_freeze.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
fix_gcmc.txt
new Section package and start doc pages and build scripts
2017-05-04 11:22:20 -06:00
fix_gld.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_gle.txt
update for fix gle docs from michele ceriotti
2017-04-18 17:07:28 -04:00
fix_gravity.txt
First batch of spelling fixes in manual
2017-03-05 18:27:38 -05:00
fix_grem.txt
reduce warning when processing manual with sphinx
2017-01-06 21:30:13 -05:00
fix_halt.txt
Correct a typo in the fix_halt.txt documentation.
2017-03-10 21:30:03 -05:00
fix_heat.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_imd.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_indent.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_ipi.txt
A tiny bugfix for the reset flag, and a brief explanation of the changes
2016-11-20 00:44:23 +01:00
fix_langevin_drude.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_langevin_eff.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_langevin.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_lb_fluid.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_lb_momentum.txt
collected documentation updates and corrections from LAMMPS-ICMS
2016-10-06 15:48:18 -04:00
fix_lb_pc.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_lb_rigid_pc_sphere.txt
collected documentation updates and corrections from LAMMPS-ICMS
2016-10-06 15:48:18 -04:00
fix_lb_viscous.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_lineforce.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_manifoldforce.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14997 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-05-10 20:05:38 +00:00
fix_meso_stationary.txt
…
fix_meso.txt
…
fix_modify.txt
fix problems with references
2017-03-27 15:01:32 -04:00
fix_momentum.txt
enable pppm/tip4p to work with triclinic
2017-01-06 10:38:32 -07:00
fix_move.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_mscg.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_msst.txt
collected documentation updates and corrections from LAMMPS-ICMS
2016-10-06 15:48:18 -04:00
fix_neb.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_nh_eff.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_nh.txt
remove duplicate paragraph in nose-hoover fix docs
2017-03-20 16:27:00 -04:00
fix_nph_asphere.txt
First batch of spelling fixes in manual
2017-03-05 18:27:38 -05:00
fix_nph_body.txt
First batch of spelling fixes in manual
2017-03-05 18:27:38 -05:00
fix_nph_sphere.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_nphug.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_npt_asphere.txt
First batch of spelling fixes in manual
2017-03-05 18:27:38 -05:00
fix_npt_body.txt
First batch of spelling fixes in manual
2017-03-05 18:27:38 -05:00
fix_npt_sphere.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_nve_asphere_noforce.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
fix_nve_asphere.txt
First batch of spelling fixes in manual
2017-03-05 18:27:38 -05:00
fix_nve_body.txt
First batch of spelling fixes in manual
2017-03-05 18:27:38 -05:00
fix_nve_dot.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_nve_dotc_langevin.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_nve_eff.txt
…
fix_nve_limit.txt
First batch of spelling fixes in manual
2017-03-05 18:27:38 -05:00
fix_nve_line.txt
collected documentation updates and corrections from LAMMPS-ICMS
2016-10-06 15:48:18 -04:00
fix_nve_manifold_rattle.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_nve_noforce.txt
…
fix_nve_sphere.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_nve_tri.txt
collected documentation updates and corrections from LAMMPS-ICMS
2016-10-06 15:48:18 -04:00
fix_nve.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
fix_nvk.txt
Moved fix_nvk to USER-MISC, updated documentation to reflect move
2016-12-28 19:06:35 +01:00
fix_nvt_asphere.txt
First batch of spelling fixes in manual
2017-03-05 18:27:38 -05:00
fix_nvt_body.txt
First batch of spelling fixes in manual
2017-03-05 18:27:38 -05:00
fix_nvt_manifold_rattle.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_nvt_sllod_eff.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_nvt_sllod.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_nvt_sphere.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_oneway.txt
…
fix_orient.txt
First batch of spelling fixes in manual
2017-03-05 18:27:38 -05:00
fix_phonon.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_pimd.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_planeforce.txt
…
fix_poems.txt
…
fix_pour.txt
fix ave/chunk fixes, 2d disc option, fix_modify dynamic/dof
2017-03-23 15:31:27 -06:00
fix_press_berendsen.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_print.txt
…
fix_property_atom.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_python.txt
fixup docs after last change
2017-05-12 00:34:47 -04:00
fix_qbmsst.txt
collected documentation updates and corrections from LAMMPS-ICMS
2016-10-06 15:48:18 -04:00
fix_qeq_comb.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_qeq_reax.txt
new Section package and start doc pages and build scripts
2017-05-04 11:22:20 -06:00
fix_qeq.txt
new Section package and start doc pages and build scripts
2017-05-04 11:22:20 -06:00
fix_qmmm.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_qtb.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_reax_bonds.txt
add support for gzip compressed output to fix reax/bonds, reax/c/bonds and reax/c/species
2017-05-10 11:19:18 -04:00
fix_reaxc_species.txt
add support for gzip compressed output to fix reax/bonds, reax/c/bonds and reax/c/species
2017-05-10 11:19:18 -04:00
fix_recenter.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15164 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-06-14 14:16:24 +00:00
fix_restrain.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_rigid.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_rx.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_saed_vtk.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_setforce.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
fix_shake.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_shardlow.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_smd_adjust_dt.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
fix_smd_integrate_tlsph.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
fix_smd_integrate_ulsph.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
fix_smd_move_triangulated_surface.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
fix_smd_setvel.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_smd_wall_surface.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_smd.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_spring_chunk.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_spring_rg.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15201 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-06-17 23:13:02 +00:00
fix_spring_self.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_spring.txt
fix spring doc page update
2017-01-17 09:02:56 -07:00
fix_srd.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_store_force.txt
…
fix_store_state.txt
collected documentation updates and corrections from LAMMPS-ICMS
2016-10-06 15:48:18 -04:00
fix_temp_berendsen.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_temp_csvr.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_temp_rescale_eff.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
fix_temp_rescale.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_tfmc.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_thermal_conductivity.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_ti_spring.txt
doc page changes
2016-10-25 09:45:55 -06:00
fix_tmd.txt
…
fix_ttm.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_tune_kspace.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_vector.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_viscosity.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
fix_viscous.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_wall_gran_region.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_wall_gran.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_wall_piston.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix_wall_reflect.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_wall_region.txt
clean up doc src
2016-10-06 13:00:46 -06:00
fix_wall_srd.txt
…
fix_wall.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
fix.txt
Moved fix_nvk to USER-MISC, updated documentation to reflect move
2016-12-28 19:06:35 +01:00
fixes.txt
Add documentation about fix python
2017-05-11 23:50:40 -04:00
group2ndx.txt
clean up doc src
2016-10-06 13:00:46 -06:00
group.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
if.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
improper_class2.txt
Updating docs for Kokkos class2
2017-02-15 13:00:33 -07:00
improper_coeff.txt
…
improper_cossq.txt
correct units for some improper force constants in docs
2017-04-26 15:34:12 -04:00
improper_cvff.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
improper_distance.txt
…
improper_fourier.txt
clean up doc src
2016-10-06 13:00:46 -06:00
improper_harmonic.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
improper_hybrid.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
improper_none.txt
…
improper_ring.txt
correct units for some improper force constants in docs
2017-04-26 15:34:12 -04:00
improper_style.txt
remove work repetitions for 'the'
2016-11-01 11:40:07 -04:00
improper_umbrella.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
improper_zero.txt
…
impropers.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
include.txt
…
info.txt
improve memory usage reporting in info and output class
2017-03-16 18:35:04 -04:00
jump.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
kspace_modify.txt
correct link for dispersion parameter how-to and reformat
2017-04-10 20:43:24 -04:00
kspace_style.txt
new CHARMM pair styles with force swithing/shifting
2017-03-24 13:53:07 -06:00
label.txt
…
lammps.book
Merge pull request #482 from akohlmey/add-pair-python
2017-05-18 11:15:58 -06:00
lattice.txt
clean up doc src
2016-10-06 13:00:46 -06:00
log.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
manifolds.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
Manual.txt
patch 4May17
2017-05-04 11:46:58 -06:00
mass.txt
…
min_modify.txt
clean up doc src
2016-10-06 13:00:46 -06:00
min_style.txt
collected documentation updates and corrections from LAMMPS-ICMS
2016-10-06 15:48:18 -04:00
minimize.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
molecule.txt
First batch of spelling fixes in manual
2017-03-05 18:27:38 -05:00
neb.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
neigh_modify.txt
new neigh_modify exclude option, other SNAP changes
2017-03-07 09:31:12 -07:00
neighbor.txt
GH changes to doc pages
2016-09-06 22:56:36 +00:00
newton.txt
…
next.txt
remove work repetitions for 'the'
2016-11-01 11:40:07 -04:00
package.txt
Tweaking docs for Kokkos package
2017-03-14 14:08:14 -06:00
pair_adp.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
pair_agni.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
pair_airebo.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
pair_awpmd.txt
…
pair_beck.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
pair_body.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
pair_bop.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_born.txt
Stan bug fixes for fix reaxc/bonds/kk
2016-11-09 15:47:50 -07:00
pair_brownian.txt
GH changes to doc pages
2016-09-06 22:56:36 +00:00
pair_buck_long.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
pair_buck.txt
fix gcmc updates from Aidan, trimming of output for replica commands
2017-04-11 08:35:09 -06:00
pair_charmm.txt
patch 11Apr17
2017-04-11 09:00:37 -06:00
pair_class2.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
pair_coeff.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15097 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-06-02 14:05:40 +00:00
pair_colloid.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_comb.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_coul_diel.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_coul.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_cs.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_dipole.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_dpd_fdt.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_dpd.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
pair_dsmc.txt
clean up doc src
2016-10-06 13:00:46 -06:00
pair_eam.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
pair_edip.txt
import multi-element compatible pair style edip as edip/multi
2017-05-16 17:40:59 -04:00
pair_eff.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
pair_eim.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_exp6_rx.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
pair_gauss.txt
two small doc corrections from Andrew Jewett for pair style gauss and dihedral style spherical
2017-05-12 23:27:58 -04:00
pair_gayberne.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_gran.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_gromacs.txt
clean up doc src
2016-10-06 13:00:46 -06:00
pair_gw.txt
move pair gw and gw/zbl to USER-MISC package
2017-05-17 14:59:46 -04:00
pair_hbond_dreiding.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
pair_hybrid.txt
Merge pull request #452 from akohlmey/small-fixes-and-updates
2017-05-04 11:23:23 -06:00
pair_kim.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
pair_kolmogorov_crespi_z.txt
remove non-ASCII characters from doc source files
2017-03-20 16:55:14 -04:00
pair_lcbop.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
pair_line_lj.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
pair_list.txt
clean up doc src
2016-10-06 13:00:46 -06:00
pair_lj96.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
pair_lj_cubic.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_lj_expand.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
pair_lj_long.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_lj_sf.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
pair_lj_smooth_linear.txt
clean up doc src
2016-10-06 13:00:46 -06:00
pair_lj_smooth.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
pair_lj_soft.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
pair_lj.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_lubricate.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_lubricateU.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_mdf.txt
…
pair_meam_spline.txt
fix duplicate reference
2017-05-16 17:53:12 -04:00
pair_meam_sw_spline.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_meam.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_mgpt.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
pair_mie.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
pair_modify.txt
add support to pair_modify to selectively disable compute/tally callbacks in sub-styles for pair hybrid and hybrid/overlay
2017-04-21 14:01:38 -04:00
pair_momb.txt
new CHARMM pair styles with force swithing/shifting
2017-03-24 13:53:07 -06:00
pair_morse.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
pair_multi_lucy_rx.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_multi_lucy.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_nb3b_harmonic.txt
remove the misleading "(which it is by default)" from several doc files
2016-11-04 12:20:17 -04:00
pair_nm.txt
clean up doc src
2016-10-06 13:00:46 -06:00
pair_none.txt
…
pair_oxdna2.txt
Upgrade to oxDNA2
2017-03-28 18:16:36 +01:00
pair_oxdna.txt
Resolved merge conflict
2017-03-28 18:58:31 +01:00
pair_peri.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
pair_polymorphic.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_python.txt
small formatting corrections to pair python style
2017-05-18 00:38:36 -04:00
pair_quip.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
pair_reax.txt
new Section package and start doc pages and build scripts
2017-05-04 11:22:20 -06:00
pair_reaxc.txt
new Section package and start doc pages and build scripts
2017-05-04 11:22:20 -06:00
pair_resquared.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_sdk.txt
rename references to USER-CG-CMM to USER-CGSDK
2017-04-26 19:27:13 -04:00
pair_smd_hertz.txt
clean up doc src
2016-10-06 13:00:46 -06:00
pair_smd_tlsph.txt
correct broken link to USER-SMD docs PDF
2016-11-28 11:34:22 -05:00
pair_smd_triangulated_surface.txt
clean up doc src
2016-10-06 13:00:46 -06:00
pair_smd_ulsph.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
pair_smtbq.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_snap.txt
fix ave/chunk fixes, 2d disc option, fix_modify dynamic/dof
2017-03-23 15:31:27 -06:00
pair_soft.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
pair_sph_heatconduction.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
pair_sph_idealgas.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
pair_sph_lj.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
pair_sph_rhosum.txt
…
pair_sph_taitwater_morris.txt
…
pair_sph_taitwater.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
pair_srp.txt
detect and refuse to run pair style srp together with fix rigid
2017-04-25 13:27:20 -04:00
pair_style.txt
clean up doc src
2016-10-06 13:00:46 -06:00
pair_sw.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_table_rx.txt
USER-DPD: update documentation for changes in commit 3faa57
2016-12-22 17:31:17 -05:00
pair_table.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_tersoff_mod.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_tersoff_zbl.txt
Remove some duplicate anchors in documentation
2017-03-16 22:36:13 -04:00
pair_tersoff.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_thole.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
pair_tri_lj.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
pair_vashishta.txt
compute pressure doc change
2016-11-17 16:11:30 -07:00
pair_write.txt
…
pair_yukawa_colloid.txt
bugfix for 2 recenty reported neighbor issues, also a ReaxFF fix species issue
2017-05-16 15:51:41 -06:00
pair_yukawa.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15588 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-09-16 16:20:06 +00:00
pair_zbl.txt
clean up doc src
2016-10-06 13:00:46 -06:00
pair_zero.txt
…
pairs.txt
Merge pull request #482 from akohlmey/add-pair-python
2017-05-18 11:15:58 -06:00
partition.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
prd.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
print.txt
clean up doc src
2016-10-06 13:00:46 -06:00
processors.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
python.txt
Add documentation about fix python
2017-05-11 23:50:40 -04:00
quit.txt
change to RCB cuts in load-balancing commands, also a new option for fix halt
2017-03-10 15:55:07 -07:00
read_data.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
read_dump.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
read_restart.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
region.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
replicate.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
rerun.txt
fix typo in rerun docs. closes #486
2017-05-16 04:27:15 -04:00
reset_timestep.txt
…
restart.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
run_style.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
run.txt
new fix halt command, other sundry small bug fixes
2016-10-18 13:11:40 -06:00
Section_accelerate.txt
clean up doc src
2016-10-06 13:00:46 -06:00
Section_commands.txt
Merge pull request #487 from akohlmey/pair_edip_multi_element
2017-05-18 09:13:30 -06:00
Section_errors.txt
print warning about minimization energy with fix box/relax
2017-05-03 15:33:22 -04:00
Section_example.txt
new CHARMM pair styles with force swithing/shifting
2017-03-24 13:53:07 -06:00
Section_history.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
Section_howto.txt
patch 11Apr17
2017-04-11 09:00:37 -06:00
Section_intro.txt
new Section package and start doc pages and build scripts
2017-05-04 11:22:20 -06:00
Section_modify.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
Section_packages.txt
correct broken links and references in documentation
2017-05-09 17:15:07 -04:00
Section_perf.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
Section_python.txt
add partial documentation for pair style python
2017-05-17 19:05:18 -04:00
Section_start.txt
correct broken links and references in documentation
2017-05-09 17:15:07 -04:00
Section_tools.txt
refactor msi2lmp documentation to emphasize lack of active development
2017-04-17 17:40:21 -04:00
set.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
shell.txt
…
special_bonds.txt
clean up doc src
2016-10-06 13:00:46 -06:00
suffix.txt
Second batch of spelling fixes in manual
2017-03-05 21:02:51 -05:00
tad.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
temper_grem.txt
another workaround for duplicate labels (which sphinx does not like)
2017-01-09 17:51:19 -05:00
temper.txt
clean up doc src
2016-10-06 13:00:46 -06:00
thermo_modify.txt
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15439 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2016-08-05 15:14:30 +00:00
thermo_style.txt
change to RCB cuts in load-balancing commands, also a new option for fix halt
2017-03-10 15:55:07 -07:00
thermo.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
timer.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
timestep.txt
clean up doc src
2016-10-06 13:00:46 -06:00
tutorial_drude.txt
changes for next patch, 2d disc options for spheres, fix external upgrade, bug fixes for fix ave/chunk for density calcs, Aidan doc page citation deconvolution
2017-03-21 08:56:37 -06:00
tutorial_github.txt
Updated images of succesful merge.
2017-01-06 19:04:26 +01:00
tutorial_pylammps.txt
remove doc text explaining restrictions that are lifted with the changes in this branch
2017-04-14 12:57:35 -04:00
tutorials.txt
Created PyLammps documentation
2016-11-18 23:58:57 -07:00
uncompute.txt
…
undump.txt
…
unfix.txt
…
units.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
variable.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
velocity.txt
fix typo in docs
2017-05-17 09:59:30 -04:00
write_coeff.txt
clean up doc src
2016-10-06 13:00:46 -06:00
write_data.txt
…
write_dump.txt
Third batch of spelling fixes in manual
2017-03-07 00:51:31 -05:00
write_restart.txt
sync with GH
2016-09-23 21:04:56 +00:00