实现了颗粒间 Hooke 力模型的 GPU 加速计算,主要包含以下内容: * 引入基础类 BaseSphere 处理球形颗粒的位置、半径和角速度数据 * 新增 GranHooke 类实现法向/切向弹性力与阻尼力的 GPU 计算逻辑 * 使用纹理内存优化颗粒属性访问(半径、质量、速度、角速度) * 实现设备端邻居列表构建和并行力计算内核 * 支持与 LAMMPS 的 FixNeighHistory 集成处理接触历史数据 * 添加 GPU 与 CPU 数据转换接口,支持混合粒子分组和冻结状态处理 * 整合到 LAMMPS 的 GPU 模块,可通过 pair_style gran/hooke/gpu 调用
134 lines
5.6 KiB
C++
134 lines
5.6 KiB
C++
/***************************************************************************
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* gran_hooke_ext.cpp
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* -------------------
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* Trung Dac Nguyen (ORNL)
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*
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* Functions for LAMMPS access to gran/hooke acceleration routines.
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*
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* __________________________________________________________________________
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* This file is part of the LAMMPS Accelerator Library (LAMMPS_AL)
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* __________________________________________________________________________
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*
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* begin :
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* email : nguyentd@ornl.gov
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***************************************************************************/
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#include <iostream>
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#include <cassert>
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#include <cmath>
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#include "lal_gran_hooke.h"
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using namespace std;
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using namespace LAMMPS_AL;
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static GranHooke<PRECISION,ACC_PRECISION> GHM;
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// ---------------------------------------------------------------------------
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// Allocate memory on host and device and copy constants to device
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// ---------------------------------------------------------------------------
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int gran_hooke_gpu_init(const int ntypes, double **cutsq,
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const double host_k_n, const double host_k_t,
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const double host_gamman, const double host_gammat,
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const double host_xmu, const double host_dt, const int host_dampflag,
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double *special_lj, int *host_mask,
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const int inum, const int nall, const int max_nbors,
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const int maxspecial, const double cell_size, int &gpu_mode,
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FILE *screen) {
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GHM.clear();
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gpu_mode=GHM.device->gpu_mode();
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double gpu_split=GHM.device->particle_split();
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int first_gpu=GHM.device->first_device();
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int last_gpu=GHM.device->last_device();
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int world_me=GHM.device->world_me();
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int gpu_rank=GHM.device->gpu_rank();
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int procs_per_gpu=GHM.device->procs_per_gpu();
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GHM.device->init_message(screen,"gran/hooke",first_gpu,last_gpu);
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bool message=false;
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if (GHM.device->replica_me()==0 && screen)
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message=true;
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if (message) {
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fprintf(screen,"Initializing Device and compiling on process 0...");
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fflush(screen);
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}
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int init_ok=0;
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if (world_me==0)
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init_ok=GHM.init(ntypes, host_k_n, host_k_t, host_gamman,
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host_gammat, host_xmu, host_dt, host_dampflag, special_lj,
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host_mask, inum, nall, max_nbors, maxspecial, cell_size,
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gpu_split, screen);
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GHM.device->world_barrier();
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if (message)
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fprintf(screen,"Done.\n");
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for (int i=0; i<procs_per_gpu; i++) {
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if (message) {
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if (last_gpu-first_gpu==0)
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fprintf(screen,"Initializing Device %d on core %d...",first_gpu,i);
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else
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fprintf(screen,"Initializing Devices %d-%d on core %d...",first_gpu,
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last_gpu,i);
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fflush(screen);
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}
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if (gpu_rank==i && world_me!=0)
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init_ok=GHM.init(ntypes, host_k_n, host_k_t, host_gamman,
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host_gammat, host_xmu, host_dt, host_dampflag, special_lj,
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host_mask, inum, nall, max_nbors, maxspecial, cell_size,
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gpu_split, screen);
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GHM.device->serialize_init();
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if (message)
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fprintf(screen,"Done.\n");
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}
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if (message)
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fprintf(screen,"\n");
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if (init_ok==0)
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GHM.estimate_gpu_overhead();
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return init_ok;
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}
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void gran_hooke_gpu_clear() {
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GHM.clear();
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}
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int ** gran_hooke_gpu_compute_n(const int ago, const int inum_full,
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const int nall, double **host_x, int *host_type,
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double *sublo, double *subhi, tagint *tag,
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int **nspecial, tagint **special,
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const bool eflag, const bool vflag,
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const bool eatom, const bool vatom,
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int &host_start, int **ilist, int **jnum,
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const double cpu_time, bool &success,
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double **host_v, double *host_rad,
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double **host_omega, double *host_rmass, int limit_damping,
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double *boxlo, double *prd) {
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return GHM.compute(ago, inum_full, nall, host_x, host_type, sublo, subhi,
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tag, nspecial, special, eflag, vflag, eatom, vatom,
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host_start, ilist, jnum, cpu_time, success, host_v, host_rad,
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host_omega, host_rmass, limit_damping, boxlo, prd);
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}
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void gran_hooke_gpu_compute(const int ago, const int inum_full,
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const int nall, double **host_x, int *host_type,
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int *ilist, int *numj, int **firstneigh,
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const bool eflag, const bool vflag,
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const bool eatom, const bool vatom,
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int &host_start, const double cpu_time,
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bool &success, tagint *tag,
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double **host_v, double *host_rad,
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double **host_omega, double *host_rmass, int limit_damping,
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const int nlocal, double *boxlo, double *prd) {
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GHM.compute(ago, inum_full, nall, host_x, host_type, ilist, numj,
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firstneigh, eflag, vflag, eatom, vatom, host_start, cpu_time,
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success, tag, host_v, host_rad, host_omega, host_rmass, limit_damping, nlocal, boxlo, prd);
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}
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double gran_hooke_gpu_bytes() {
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return GHM.host_memory_usage();
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} |