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lammps/doc/src
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Axel Kohlmeyer 842fe150eb update coul/slater docs to align with recent changes in upstream
2020-03-18 21:07:57 -04:00
..
_ext
update sphinx extension to automatically pad lists to fill tables and avoid errors processing the documentation
2020-01-21 11:39:29 -05:00
99
Fix typo
2020-03-14 13:57:48 +09:00
2001
Fix typo
2020-03-14 13:57:48 +09:00
Developer
…
JPG
trim the lammps logo a little bit
2020-02-23 15:01:10 -05:00
PDF
Update Colvars to version 2020-02-27
2020-02-27 19:55:31 -05:00
USER/atc
Fix typo
2020-03-14 13:57:48 +09:00
.gitignore
merged in current master
2020-01-13 10:34:31 -07:00
angle_charmm.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
angle_class2.rst
collapse multiple empty lines into a single empty line
2020-03-10 15:56:11 -04:00
angle_coeff.rst
collapse multiple empty lines into a single empty line
2020-03-10 15:56:11 -04:00
angle_cosine_buck6d.rst
collapse multiple empty lines into a single empty line
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angle_cosine_delta.rst
collapse multiple empty lines into a single empty line
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angle_cosine_periodic.rst
collapse multiple empty lines into a single empty line
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angle_cosine_shift_exp.rst
collapse multiple empty lines into a single empty line
2020-03-10 15:56:11 -04:00
angle_cosine_shift.rst
collapse multiple empty lines into a single empty line
2020-03-10 15:56:11 -04:00
angle_cosine_squared.rst
collapse multiple empty lines into a single empty line
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angle_cosine.rst
collapse multiple empty lines into a single empty line
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angle_cross.rst
replace '\_' with '_' in plain text where possible
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angle_dipole.rst
collapse multiple empty lines into a single empty line
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angle_fourier_simple.rst
replace '\_' with '_' in plain text where possible
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angle_fourier.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
angle_harmonic.rst
collapse multiple empty lines into a single empty line
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angle_hybrid.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
angle_mm3.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
angle_none.rst
collapse multiple empty lines into a single empty line
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angle_quartic.rst
replace '\_' with '_' in plain text where possible
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angle_sdk.rst
replace '\_' with '_' in plain text where possible
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angle_style.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
angle_table.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
angle_zero.rst
collapse multiple empty lines into a single empty line
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angles.rst
collapse multiple empty lines into a single empty line
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atom_modify.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
atom_style.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
balance.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
bond_class2.rst
collapse multiple empty lines into a single empty line
2020-03-10 15:56:11 -04:00
bond_coeff.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
bond_fene_expand.rst
collapse multiple empty lines into a single empty line
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bond_fene.rst
collapse multiple empty lines into a single empty line
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bond_gromos.rst
collapse multiple empty lines into a single empty line
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bond_harmonic_shift_cut.rst
collapse multiple empty lines into a single empty line
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bond_harmonic_shift.rst
collapse multiple empty lines into a single empty line
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bond_harmonic.rst
collapse multiple empty lines into a single empty line
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bond_hybrid.rst
replace '\_' with '_' in plain text where possible
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bond_mm3.rst
replace '\_' with '_' in plain text where possible
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bond_morse.rst
collapse multiple empty lines into a single empty line
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bond_none.rst
collapse multiple empty lines into a single empty line
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bond_nonlinear.rst
collapse multiple empty lines into a single empty line
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bond_oxdna.rst
collapse multiple empty lines into a single empty line
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bond_quartic.rst
collapse multiple empty lines into a single empty line
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bond_style.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
bond_table.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
bond_write.rst
collapse multiple empty lines into a single empty line
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bond_zero.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
bonds.rst
collapse multiple empty lines into a single empty line
2020-03-10 15:56:11 -04:00
boundary.rst
convert more LAMMPS script examples to use code-block instead of parsed-literal
2020-03-12 01:11:38 -04:00
box.rst
convert more LAMMPS script examples to use code-block instead of parsed-literal
2020-03-12 01:11:38 -04:00
Build_basics.rst
make behavior of CMAKE_TUNE_FLAGS more consistent and allow to turn it off
2020-03-17 19:16:02 -04:00
Build_cmake.rst
avoid spelling errors
2020-03-18 17:16:47 -04:00
Build_development.rst
Merge branch 'master' into collected-small-changes
2020-03-18 20:59:16 -04:00
Build_extras.rst
some more typesetting improvements
2020-03-13 19:41:33 -04:00
Build_link.rst
Some more code-blocks instead of parsed-literal
2020-03-13 18:38:47 -04:00
Build_make.rst
Some more code-blocks instead of parsed-literal
2020-03-13 18:38:47 -04:00
Build_package.rst
some more typesetting improvements
2020-03-13 19:41:33 -04:00
Build_settings.rst
some more typesetting improvements
2020-03-13 19:41:33 -04:00
Build_windows.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
Build.rst
collapse multiple empty lines into a single empty line
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change_box.rst
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clear.rst
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comm_modify.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
comm_style.rst
collapse multiple empty lines into a single empty line
2020-03-10 15:56:11 -04:00
Commands_all.rst
tweak command overview table width so it is readable in PDF
2020-02-28 18:51:52 +01:00
Commands_bond.rst
collapse multiple empty lines into a single empty line
2020-03-10 15:56:11 -04:00
Commands_category.rst
convert lists to tables for more compact presentation
2020-02-28 18:52:13 +01:00
Commands_compute.rst
tweak command overview table width so it is readable in PDF
2020-02-28 18:51:52 +01:00
Commands_fix.rst
tweak command overview table width so it is readable in PDF
2020-02-28 18:51:52 +01:00
Commands_input.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
Commands_kspace.rst
remove backslash escapes for underscore in doc references
2020-01-23 16:52:38 -05:00
commands_list.rst
collapse multiple empty lines into a single empty line
2020-03-10 15:56:11 -04:00
Commands_pair.rst
Merge pull request #1883 from evoyiatzis/master
2020-03-18 20:52:47 -04:00
Commands_parse.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
Commands_removed.rst
delete empty lines at the end of files
2020-01-31 14:03:52 -05:00
Commands_structure.rst
remove trailing whitespace from documentation sources
2020-03-10 15:51:06 -04:00
Commands.rst
collapse multiple empty lines into a single empty line
2020-03-10 15:56:11 -04:00
compute_ackland_atom.rst
convert more LAMMPS script examples to use code-block instead of parsed-literal
2020-03-12 01:11:38 -04:00
compute_adf.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_angle_local.rst
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2020-03-13 16:34:57 -04:00
compute_angle.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_angmom_chunk.rst
convert more LAMMPS script examples to use code-block instead of parsed-literal
2020-03-12 01:11:38 -04:00
compute_basal_atom.rst
convert more LAMMPS script examples to use code-block instead of parsed-literal
2020-03-12 01:11:38 -04:00
compute_body_local.rst
replace '\_' with '_' in plain text where possible
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compute_bond_local.rst
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compute_bond.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_centro_atom.rst
convert more LAMMPS script examples to use code-block instead of parsed-literal
2020-03-12 01:11:38 -04:00
compute_chunk_atom.rst
some more fixups
2020-03-13 17:02:59 -04:00
compute_chunk_spread_atom.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_cluster_atom.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_cna_atom.rst
convert more LAMMPS script examples to use code-block instead of parsed-literal
2020-03-12 01:11:38 -04:00
compute_cnp_atom.rst
convert more LAMMPS script examples to use code-block instead of parsed-literal
2020-03-12 01:11:38 -04:00
compute_com_chunk.rst
convert more LAMMPS script examples to use code-block instead of parsed-literal
2020-03-12 01:11:38 -04:00
compute_com.rst
convert more LAMMPS script examples to use code-block instead of parsed-literal
2020-03-12 01:11:38 -04:00
compute_contact_atom.rst
convert more LAMMPS script examples to use code-block instead of parsed-literal
2020-03-12 01:11:38 -04:00
compute_coord_atom.rst
replace '\_' with '_' in plain text where possible
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compute_damage_atom.rst
convert more LAMMPS script examples to use code-block instead of parsed-literal
2020-03-12 01:11:38 -04:00
compute_dihedral_local.rst
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compute_dihedral.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_dilatation_atom.rst
convert more LAMMPS script examples to use code-block instead of parsed-literal
2020-03-12 01:11:38 -04:00
compute_dipole_chunk.rst
convert more LAMMPS script examples to use code-block instead of parsed-literal
2020-03-12 01:11:38 -04:00
compute_displace_atom.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_dpd_atom.rst
more conversion of parsed-literal to code-block and a bunch of other issues
2020-03-12 08:11:10 -04:00
compute_dpd.rst
convert more LAMMPS script examples to use code-block instead of parsed-literal
2020-03-12 01:11:38 -04:00
compute_edpd_temp_atom.rst
convert more LAMMPS script examples to use code-block instead of parsed-literal
2020-03-12 01:11:38 -04:00
compute_entropy_atom.rst
convert more LAMMPS script examples to use code-block instead of parsed-literal
2020-03-12 01:11:38 -04:00
compute_erotate_asphere.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_erotate_rigid.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_erotate_sphere_atom.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_erotate_sphere.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_event_displace.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_fep.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_global_atom.rst
some more fixups
2020-03-13 17:02:59 -04:00
compute_group_group.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_gyration_chunk.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_gyration_shape_chunk.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_gyration_shape.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_gyration.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_heat_flux.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_hexorder_atom.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_hma.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_improper_local.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_improper.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_inertia_chunk.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_ke_atom_eff.rst
collapse multiple empty lines into a single empty line
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compute_ke_atom.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_ke_eff.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_ke_rigid.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_ke.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_meso_e_atom.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_meso_rho_atom.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_meso_t_atom.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_modify.rst
collapse multiple empty lines into a single empty line
2020-03-10 15:56:11 -04:00
compute_momentum.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_msd_chunk.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_msd_nongauss.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_msd.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_omega_chunk.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_orientorder_atom.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_pair_local.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_pair.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_pe_atom.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_pe.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_plasticity_atom.rst
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2020-03-13 16:34:57 -04:00
compute_pressure_cylinder.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_pressure_uef.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_pressure.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_property_atom.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_property_chunk.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_property_local.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_ptm_atom.rst
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compute_rdf.rst
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2020-03-13 16:34:57 -04:00
compute_reduce_chunk.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_reduce.rst
some more fixups
2020-03-13 17:02:59 -04:00
compute_rigid_local.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_saed.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_slice.rst
some more fixups
2020-03-13 17:02:59 -04:00
compute_smd_contact_radius.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_smd_damage.rst
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2020-03-13 16:34:57 -04:00
compute_smd_hourglass_error.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_smd_internal_energy.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_smd_plastic_strain_rate.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_smd_plastic_strain.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_smd_rho.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_smd_tlsph_defgrad.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_smd_tlsph_dt.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_smd_tlsph_num_neighs.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_smd_tlsph_shape.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_smd_tlsph_strain_rate.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_smd_tlsph_strain.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_smd_tlsph_stress.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_smd_triangle_vertices.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_smd_ulsph_num_neighs.rst
collapse multiple empty lines into a single empty line
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compute_smd_ulsph_strain_rate.rst
collapse multiple empty lines into a single empty line
2020-03-10 15:56:11 -04:00
compute_smd_ulsph_strain.rst
collapse multiple empty lines into a single empty line
2020-03-10 15:56:11 -04:00
compute_smd_ulsph_stress.rst
collapse multiple empty lines into a single empty line
2020-03-10 15:56:11 -04:00
compute_smd_vol.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_sna_atom.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_spin.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_stress_atom.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_stress_mop.rst
replace '\_' with '_' in plain text where possible
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compute_tally.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_tdpd_cc_atom.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_temp_asphere.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_temp_body.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_temp_chunk.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_temp_com.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_temp_cs.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_temp_deform_eff.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_temp_deform.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_temp_drude.rst
replace '\_' with '_' in plain text where possible
2020-03-13 16:34:57 -04:00
compute_temp_eff.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_temp_partial.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_temp_profile.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_temp_ramp.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_temp_region_eff.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_temp_region.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_temp_rotate.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_temp_sphere.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_temp_uef.rst
convert all remaining compute styles to use code-block instead of parsed literal
2020-03-12 01:56:13 -04:00
compute_temp.rst
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compute_ti.rst
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compute_torque_chunk.rst
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compute_vacf.rst
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compute_vcm_chunk.rst
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compute_voronoi_atom.rst
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compute_xrd.rst
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compute.rst
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computes.rst
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create_atoms.rst
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create_box.rst
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delete_atoms.rst
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delete_bonds.rst
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dielectric.rst
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dihedral_harmonic.rst
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dihedral_none.rst
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dihedral_opls.rst
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dihedral_table.rst
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dihedral_zero.rst
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dihedrals.rst
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dimension.rst
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displace_atoms.rst
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dump_adios.rst
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dump_image.rst
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dump_modify.rst
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dump_molfile.rst
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dump_netcdf.rst
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dump.rst
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dynamical_matrix.rst
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echo.rst
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Errors_bugs.rst
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Errors_common.rst
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Errors_messages.rst
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Errors.rst
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Examples.rst
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fix_ave_atom.rst
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fix_colvars.rst
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fix_controller.rst
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fix_drude.rst
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fix_rx.rst
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fix_srd.rst
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fix_store_force.rst
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fix_store_state.rst
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fix_temp_berendsen.rst
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fix_temp_csvr.rst
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fix_temp_rescale_eff.rst
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fix_temp_rescale.rst
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fix_tfmc.rst
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fix_thermal_conductivity.rst
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fix_ti_spring.rst
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fix_tmd.rst
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fix_ttm.rst
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fix_tune_kspace.rst
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fix_vector.rst
some more fixups
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fix_viscosity.rst
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fix_viscous.rst
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fix_wall_body_polygon.rst
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fix_wall_body_polyhedron.rst
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fix_wall_ees.rst
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fix_wall_gran_region.rst
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fix_wall_gran.rst
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fix_wall_piston.rst
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fix_wall_reflect_stochastic.rst
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fix_wall_reflect.rst
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fix_wall_region.rst
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fix_wall_srd.rst
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fix_wall.rst
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fix.rst
some more fixups
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fixes.rst
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group2ndx.rst
more conversion of parsed-literal to code-block and a bunch of other issues
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group.rst
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Howto_2d.rst
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Howto_barostat.rst
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Howto_bash.rst
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Howto_bioFF.rst
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Howto_body.rst
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Howto_chunk.rst
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Howto_client_server.rst
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Howto_coreshell.rst
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Howto_couple.rst
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Howto_diffusion.rst
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Howto_dispersion.rst
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Howto_drude2.rst
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Howto_drude.rst
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Howto_elastic.rst
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Howto_github.rst
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Howto_granular.rst
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Howto_kappa.rst
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Howto_library.rst
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Howto_manifold.rst
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Howto_multiple.rst
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Howto_nemd.rst
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Howto_polarizable.rst
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Howto_pylammps.rst
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Howto_replica.rst
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Howto_restart.rst
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Howto_spc.rst
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Howto_spherical.rst
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Howto_spins.rst
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Howto_temperature.rst
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Howto_thermostat.rst
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Howto_tip3p.rst
typeset symbols in water model howtos
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Howto_tip4p.rst
Merge branch 'DOI' of github.com:e-kwsm/lammps into doc-cleanup
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Howto_triclinic.rst
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Howto_viscosity.rst
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Howto_viz.rst
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Howto_walls.rst
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Howto.rst
update lammps.sandia.gov URLs to use https://
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hyper.rst
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if.rst
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improper_class2.rst
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improper_coeff.rst
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improper_cossq.rst
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improper_cvff.rst
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improper_distance.rst
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improper_distharm.rst
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improper_fourier.rst
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improper_harmonic.rst
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improper_hybrid.rst
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improper_inversion_harmonic.rst
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improper_none.rst
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improper_ring.rst
some minor fixups
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improper_sqdistharm.rst
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improper_style.rst
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improper_umbrella.rst
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improper_zero.rst
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impropers.rst
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include.rst
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info.rst
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Install_conda.rst
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Install_git.rst
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Install_linux.rst
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Install_mac.rst
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Install_patch.rst
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Install_tarball.rst
some more typesetting improvements
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Install_windows.rst
some more typesetting improvements
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Install.rst
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Intro_authors.rst
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Intro_features.rst
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Intro_nonfeatures.rst
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Intro_opensource.rst
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Intro_overview.rst
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Intro_website.rst
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Intro.rst
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jump.rst
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kim_commands.rst
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kspace_modify.rst
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kspace_style.rst
Merge pull request #1938 from akohlmey/doc-remove-backslash-underscore
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label.rst
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lattice.rst
more conversion of parsed-literal to code-block and a bunch of other issues
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log.rst
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Manual_build.rst
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Manual_version.rst
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Manual.rst
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mass.rst
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message.rst
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min_modify.rst
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min_spin.rst
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min_style.rst
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minimize.rst
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Modify_atom.rst
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Modify_body.rst
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Modify_bond.rst
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Modify_command.rst
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Modify_compute.rst
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Modify_contribute.rst
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Modify_dump.rst
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Modify_fix.rst
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Modify_kspace.rst
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Modify_min.rst
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Modify_overview.rst
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Modify_pair.rst
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Modify_region.rst
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Modify_thermo.rst
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Modify_variable.rst
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Modify.rst
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molecule.rst
Merge branch 'master' into molecule_template_moleculeIDs
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neb_spin.rst
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neb.rst
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neigh_modify.rst
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neighbor.rst
more conversion of parsed-literal to code-block and a bunch of other issues
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newton.rst
more conversion of parsed-literal to code-block and a bunch of other issues
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next.rst
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package.rst
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Packages_details.rst
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Packages_standard.rst
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Packages_user.rst
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Packages.rst
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pair_adp.rst
some minor fixups
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pair_agni.rst
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pair_airebo.rst
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pair_atm.rst
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pair_awpmd.rst
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pair_beck.rst
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pair_body_nparticle.rst
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pair_body_rounded_polygon.rst
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pair_body_rounded_polyhedron.rst
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pair_bop.rst
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pair_born.rst
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pair_brownian.rst
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pair_buck6d_coul_gauss.rst
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pair_buck_long.rst
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pair_buck.rst
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pair_charmm.rst
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pair_class2.rst
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pair_coeff.rst
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pair_colloid.rst
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pair_comb.rst
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pair_cosine_squared.rst
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pair_coul_diel.rst
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pair_coul_shield.rst
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pair_coul_slater.rst
update coul/slater docs to align with recent changes in upstream
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pair_coul.rst
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pair_cs.rst
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pair_dipole.rst
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pair_dpd_fdt.rst
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pair_dpd.rst
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pair_drip.rst
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pair_dsmc.rst
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pair_e3b.rst
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pair_eam.rst
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pair_edip.rst
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pair_eff.rst
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pair_eim.rst
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pair_exp6_rx.rst
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pair_extep.rst
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pair_fep_soft.rst
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pair_gauss.rst
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pair_gayberne.rst
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pair_gran.rst
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pair_granular.rst
small spelling update
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pair_gromacs.rst
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pair_gw.rst
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pair_hbond_dreiding.rst
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pair_hybrid.rst
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pair_ilp_graphene_hbn.rst
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pair_kim.rst
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pair_kolmogorov_crespi_full.rst
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pair_kolmogorov_crespi_z.rst
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pair_lcbop.rst
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pair_lebedeva_z.rst
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pair_line_lj.rst
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pair_list.rst
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pair_lj96.rst
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pair_lj_cubic.rst
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pair_lj_expand.rst
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pair_lj_long.rst
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pair_lj_smooth_linear.rst
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pair_lj_smooth.rst
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pair_lj_switch3_coulgauss_long.rst
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pair_lj.rst
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pair_local_density.rst
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pair_lubricate.rst
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pair_lubricateU.rst
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pair_mdf.rst
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pair_meam_spline.rst
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pair_meam_sw_spline.rst
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pair_meamc.rst
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pair_mesocnt.rst
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pair_mesodpd.rst
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pair_mgpt.rst
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pair_mie.rst
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pair_mm3_switch3_coulgauss_long.rst
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pair_modify.rst
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pair_momb.rst
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pair_morse.rst
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pair_multi_lucy_rx.rst
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pair_multi_lucy.rst
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pair_nb3b_harmonic.rst
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pair_nm.rst
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pair_none.rst
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pair_oxdna2.rst
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pair_oxdna.rst
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pair_oxrna2.rst
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pair_peri.rst
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pair_polymorphic.rst
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pair_python.rst
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pair_quip.rst
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pair_reaxc.rst
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pair_resquared.rst
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pair_sdk.rst
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pair_sdpd_taitwater_isothermal.rst
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pair_smd_hertz.rst
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pair_smd_tlsph.rst
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pair_smd_triangulated_surface.rst
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pair_smd_ulsph.rst
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pair_smtbq.rst
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pair_snap.rst
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pair_soft.rst
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pair_sph_heatconduction.rst
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pair_sph_idealgas.rst
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pair_sph_lj.rst
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pair_sph_rhosum.rst
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pair_sph_taitwater_morris.rst
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pair_sph_taitwater.rst
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pair_spin_dipole.rst
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pair_spin_dmi.rst
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pair_spin_exchange.rst
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pair_spin_magelec.rst
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pair_spin_neel.rst
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pair_srp.rst
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pair_style.rst
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pair_sw.rst
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pair_table_rx.rst
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pair_table.rst
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pair_tersoff_mod.rst
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pair_tersoff_zbl.rst
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pair_tersoff.rst
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pair_thole.rst
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pair_tri_lj.rst
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pair_ufm.rst
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pair_vashishta.rst
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pair_write.rst
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pair_yukawa_colloid.rst
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pair_yukawa.rst
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pair_zbl.rst
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pair_zero.rst
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pairs.rst
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partition.rst
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prd.rst
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print.rst
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processors.rst
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Python_call.rst
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Python_examples.rst
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Python_head.rst
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Python_install.rst
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Python_library.rst
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Python_mpi.rst
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Python_overview.rst
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Python_pylammps.rst
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Python_run.rst
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Python_shlib.rst
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Python_test.rst
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python.rst
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quit.rst
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read_data.rst
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read_dump.rst
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read_restart.rst
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region.rst
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replicate.rst
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rerun.rst
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reset_ids.rst
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reset_timestep.rst
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restart.rst
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Run_basics.rst
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Run_head.rst
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Run_options.rst
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Run_output.rst
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run_style.rst
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Run_windows.rst
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run.rst
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server_mc.rst
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server_md.rst
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server.rst
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set.rst
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shell.rst
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special_bonds.rst
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Speed_bench.rst
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Speed_compare.rst
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Speed_gpu.rst
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Speed_intel.rst
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Speed_kokkos.rst
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Speed_measure.rst
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Speed_omp.rst
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Speed_opt.rst
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Speed_packages.rst
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Speed_tips.rst
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Speed.rst
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suffix.rst
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tad.rst
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temper_grem.rst
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temper_npt.rst
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temper.rst
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thermo_modify.rst
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thermo_style.rst
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thermo.rst
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third_order.rst
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timer.rst
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timestep.rst
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Tools.rst
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uncompute.rst
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undump.rst
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unfix.rst
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units.rst
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variable.rst
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velocity.rst
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write_coeff.rst
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write_data.rst
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write_dump.rst
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write_restart.rst
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