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lammps/examples/amoeba/data.water_hexamer.hippo
2022-04-08 17:16:12 -06:00

99 lines
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LAMMPS data file created from Tinker water_hexamer.xyz and hippo_water.prm files
18 atoms
12 bonds
6 angles
2 atom types
1 bond types
1 angle types
-2.517835 2.675716 xlo xhi
-1.523041 2.01883 ylo yhi
-1.734766 2.220847 zlo zhi
Masses
1 15.999
2 1.008
Atoms
1 1 1 0 -1.502169 -0.191359 1.434927
2 1 2 0 -0.601054 -0.596972 1.553718
3 1 2 0 -2.006698 -0.422327 2.219847
4 2 1 0 -1.744575 -0.382348 -1.309144
5 2 2 0 -1.888941 -0.479653 -0.347624
6 2 2 0 -2.516835 -0.766765 -1.733766
7 3 1 0 -0.560409 2.017830 -0.121984
8 3 2 0 -0.947720 1.533567 0.625228
9 3 2 0 -0.989831 1.592736 -0.877419
10 4 1 0 0.964803 -1.165765 1.439987
11 4 2 0 0.979557 -1.522041 0.527833
12 4 2 0 1.542224 -0.393692 1.344373
13 5 1 0 0.974705 -1.401503 -1.335970
14 5 2 0 0.065161 -1.118951 -1.522886
15 5 2 0 1.470709 -0.570933 -1.277710
16 6 1 0 2.002280 1.057824 -0.124502
17 6 2 0 1.141637 1.532266 -0.140121
18 6 2 0 2.674716 1.735342 -0.237995
Bonds
1 1 1 2
2 1 1 3
3 1 4 5
4 1 4 6
5 1 7 8
6 1 7 9
7 1 10 11
8 1 10 12
9 1 13 14
10 1 13 15
11 1 16 17
12 1 16 18
Angles
1 1 2 1 3
2 1 5 4 6
3 1 8 7 9
4 1 11 10 12
5 1 14 13 15
6 1 17 16 18
Bond Coeffs
1 0.9572 556.85 -1419.9675 2112.20165625
Angle Coeffs
1 0 0 107.7 48.7 -39.064262472 8.95286947775 -6.41202044508 11.5462823034
BondAngle Coeffs
1 0.0 0.0 0.0 0.0
UreyBradley Coeffs
1 0.0 0.0
Tinker Types
1 1
2 2
3 2
4 1
5 2
6 2
7 1
8 2
9 2
10 1
11 2
12 2
13 1
14 2
15 2
16 1
17 2
18 2