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lammps/examples/USER/eff/Li-dendritic/in.Li-dendritic.nvt

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variable sname index Li-dendritic
log ${sname}.min.log
units electron
newton on
boundary p p p
atom_style electron
read_data data.${sname}
#read_restart ${sname}.min.restart
pair_style eff/cut 50.112
pair_coeff * *
communicate single vel yes
compute effTemp all temp/eff
compute effPress all pressure effTemp
thermo 10
thermo_style custom step pe temp press
thermo_modify temp effTemp press effPress
print "Starting minimizer"
min_style cg
#dump 1 all custom 100 ${sname}.min.lammpstrj id type x y z q spin eradius
#dump 2 all xyz 100 ${sname}.min.xyz
min_modify line quadratic dmax 0.05
minimize 0 1.0e-7 1000 2000
write_restart ${sname}.min.restart
#undump 1
#undump 2
# NVT
reset_timestep 0
timestep 0.005
print "Starting nvt"
fix 1 all nvt/eff temp 300.0 300.0 0.1
dump 1 all custom 100 ${sname}.nvt.lammpstrj id type x y z spin eradius
dump 2 all xyz 100 ${sname}.nvt.xyz
restart 100 ${sname}.nvt.restart1 ${sname}.nvt.restart2
run 10000
undump 1
undump 2