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lammps/src/KSPACE/pppm.h

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/* -*- c++ -*- ----------------------------------------------------------
LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator
https://www.lammps.org/, Sandia National Laboratories
Steve Plimpton, sjplimp@sandia.gov
Copyright (2003) Sandia Corporation. Under the terms of Contract
DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains
certain rights in this software. This software is distributed under
the GNU General Public License.
See the README file in the top-level LAMMPS directory.
------------------------------------------------------------------------- */
#ifdef KSPACE_CLASS
// clang-format off
KSpaceStyle(pppm,PPPM);
// clang-format on
#else
#ifndef LMP_PPPM_H
#define LMP_PPPM_H
#include "kspace.h"
#include "lmpfftsettings.h"
namespace LAMMPS_NS {
class PPPM : public KSpace {
public:
PPPM(class LAMMPS *);
~PPPM() override;
void settings(int, char **) override;
void init() override;
void setup() override;
void setup_grid() override;
void compute(int, int) override;
int timing_1d(int, double &) override;
int timing_3d(int, double &) override;
double memory_usage() override;
void compute_group_group(int, int, int) override;
protected:
int me, nprocs;
int nfactors;
int *factors;
double cutoff;
double volume;
double delxinv, delyinv, delzinv, delvolinv;
double h_x, h_y, h_z;
double shift, shiftone;
int peratom_allocate_flag;
int nxlo_in, nylo_in, nzlo_in, nxhi_in, nyhi_in, nzhi_in;
int nxlo_out, nylo_out, nzlo_out, nxhi_out, nyhi_out, nzhi_out;
int nxlo_ghost, nxhi_ghost, nylo_ghost, nyhi_ghost, nzlo_ghost, nzhi_ghost;
int nxlo_fft, nylo_fft, nzlo_fft, nxhi_fft, nyhi_fft, nzhi_fft;
int nlower, nupper;
int ngrid, nfft, nfft_both;
FFT_SCALAR ***density_brick;
FFT_SCALAR ***vdx_brick, ***vdy_brick, ***vdz_brick;
FFT_SCALAR ***u_brick;
FFT_SCALAR ***v0_brick, ***v1_brick, ***v2_brick;
FFT_SCALAR ***v3_brick, ***v4_brick, ***v5_brick;
double *greensfn;
double **vg;
double *fkx, *fky, *fkz;
FFT_SCALAR *density_fft;
FFT_SCALAR *work1, *work2;
double *gf_b;
FFT_SCALAR **rho1d, **rho_coeff, **drho1d, **drho_coeff;
double *sf_precoeff1, *sf_precoeff2, *sf_precoeff3;
double *sf_precoeff4, *sf_precoeff5, *sf_precoeff6;
double sf_coeff[6]; // coefficients for calculating ad self-forces
double **acons;
// FFTs and grid communication
class FFT3d *fft1, *fft2;
class Remap *remap;
class GridComm *gc;
FFT_SCALAR *gc_buf1, *gc_buf2;
int ngc_buf1, ngc_buf2, npergrid;
// group-group interactions
int group_allocate_flag;
FFT_SCALAR ***density_A_brick, ***density_B_brick;
FFT_SCALAR *density_A_fft, *density_B_fft;
int **part2grid; // storage for particle -> grid mapping
int nmax;
double *boxlo;
// TIP4P settings
int typeH, typeO; // atom types of TIP4P water H and O atoms
double qdist; // distance from O site to negative charge
double alpha; // geometric factor
virtual void set_grid_global();
virtual void set_grid_local();
void adjust_gewald();
virtual double newton_raphson_f();
double derivf();
double final_accuracy();
virtual void allocate();
virtual void allocate_peratom();
virtual void deallocate();
virtual void deallocate_peratom();
int factorable(int);
virtual double compute_df_kspace();
double estimate_ik_error(double, double, bigint);
virtual double compute_qopt();
virtual void compute_gf_denom();
virtual void compute_gf_ik();
virtual void compute_gf_ad();
void compute_sf_precoeff();
virtual void particle_map();
virtual void make_rho();
virtual void brick2fft();
virtual void poisson();
virtual void poisson_ik();
virtual void poisson_ad();
virtual void fieldforce();
virtual void fieldforce_ik();
virtual void fieldforce_ad();
virtual void poisson_peratom();
virtual void fieldforce_peratom();
void procs2grid2d(int, int, int, int *, int *);
void compute_rho1d(const FFT_SCALAR &, const FFT_SCALAR &, const FFT_SCALAR &);
void compute_drho1d(const FFT_SCALAR &, const FFT_SCALAR &, const FFT_SCALAR &);
void compute_rho_coeff();
virtual void slabcorr();
// grid communication
void pack_forward_grid(int, void *, int, int *) override;
void unpack_forward_grid(int, void *, int, int *) override;
void pack_reverse_grid(int, void *, int, int *) override;
void unpack_reverse_grid(int, void *, int, int *) override;
// triclinic
int triclinic; // domain settings, orthog or triclinic
void setup_triclinic();
void compute_gf_ik_triclinic();
void poisson_ik_triclinic();
void poisson_groups_triclinic();
// group-group interactions
virtual void allocate_groups();
virtual void deallocate_groups();
virtual void make_rho_groups(int, int, int);
virtual void poisson_groups(int);
virtual void slabcorr_groups(int, int, int);
/* ----------------------------------------------------------------------
denominator for Hockney-Eastwood Green's function
of x,y,z = sin(kx*deltax/2), etc
inf n-1
S(n,k) = Sum W(k+pi*j)**2 = Sum b(l)*(z*z)**l
j=-inf l=0
= -(z*z)**n /(2n-1)! * (d/dx)**(2n-1) cot(x) at z = sin(x)
gf_b = denominator expansion coeffs
------------------------------------------------------------------------- */
inline double gf_denom(const double &x, const double &y, const double &z) const
{
double sx, sy, sz;
sz = sy = sx = 0.0;
for (int l = order - 1; l >= 0; l--) {
sx = gf_b[l] + sx * x;
sy = gf_b[l] + sy * y;
sz = gf_b[l] + sz * z;
}
double s = sx * sy * sz;
return s * s;
};
};
} // namespace LAMMPS_NS
#endif
#endif