66 lines
1.9 KiB
C++
66 lines
1.9 KiB
C++
/* -*- c++ -*- ----------------------------------------------------------
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LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator
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https://www.lammps.org/, Sandia National Laboratories
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Steve Plimpton, sjplimp@sandia.gov
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Copyright (2003) Sandia Corporation. Under the terms of Contract
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DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains
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certain rights in this software. This software is distributed under
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the GNU General Public License.
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See the README file in the top-level LAMMPS directory.
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Contributed by Axel Kohlmeyer (Temple U)
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------------------------------------------------------------------------- */
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#ifdef READER_CLASS
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// clang-format off
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ReaderStyle(molfile,ReaderMolfile);
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// clang-format on
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#else
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#ifndef LMP_READER_MOLFILE_H
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#define LMP_READER_MOLFILE_H
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#include "reader.h"
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namespace LAMMPS_NS {
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class ReaderMolfile : public Reader {
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public:
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ReaderMolfile(class LAMMPS *);
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~ReaderMolfile() override;
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void settings(int, char **) override;
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int read_time(bigint &) override;
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void skip() override;
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bigint read_header(double[3][3], int &, int &, int, int, int *, char **, int, int, int &, int &,
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int &, int &) override;
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void read_atoms(int, int, double **) override;
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void open_file(const std::string &) override;
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void close_file() override;
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private:
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int *fieldindex; // mapping of input fields to dump
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class MolfileInterface *mf;
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float *coords; // pointer to temporary coordinate storage
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float *vels; // pointer to temporary velocity storage
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int *types; // pointer to temporary type info storage
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float cell[6]; // box info (stored as, a, b, c, alpha, beta, gamma)
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int natoms; // current number of atoms
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int needvels; // 1 if velocities are required, otherwise 0
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bigint nstep; // current (time) step number
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bigint nid; // current atom id.
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int me;
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};
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} // namespace LAMMPS_NS
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#endif
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#endif
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