update URLs in some more files
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"source": [
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"## Prerequisites\n",
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"\n",
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"Before Running this example, make sure your Python environment can find the LAMMPS shared library (`liblammps.so`) and the LAMMPS Python package is installed. If you followed the [README](README.md) in this folder, this should already be the case. You can also find more information about how to compile LAMMPS and install the LAMMPS Python package in the [LAMMPS manual](https://lammps.sandia.gov/doc/Python_install.html). There is also a dedicated [PyLammps HowTo](https://lammps.sandia.gov/doc/Howto_pylammps.html)."
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"Before Running this example, make sure your Python environment can find the LAMMPS shared library (`liblammps.so`) and the LAMMPS Python package is installed. If you followed the [README](README.md) in this folder, this should already be the case. You can also find more information about how to compile LAMMPS and install the LAMMPS Python package in the [LAMMPS manual](https://docs.lammps.org/Python_install.html). There is also a dedicated [PyLammps HowTo](https://docs.lammps.org/Howto_pylammps.html)."
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]
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},
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{
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"source": [
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"## Visualizing the initial state\n",
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"\n",
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"`IPyLammps` allows you to visualize the current simulation state with the [image](https://lammps.sandia.gov/doc/Python_module.html#lammps.IPyLammps.image) command. Here we use it to create an image of the initial state of the system."
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"`IPyLammps` allows you to visualize the current simulation state with the [image](https://docs.lammps.org/Python_module.html#lammps.IPyLammps.image) command. Here we use it to create an image of the initial state of the system."
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]
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},
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{
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