Updated online docu
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@ -99,10 +99,10 @@ duplexes or arrays of DNA/RNA duplexes can be found in
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examples/PACKAGES/cgdna/util/.
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Please cite :ref:`(Henrich) <Henrich0>` in any publication that uses
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this implementation. The article contains general information
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this implementation. An updated documentation that contains general information
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on the model, its implementation and performance as well as the structure of
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the data and input file. The preprint version of the article can be found
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`here <PDF/CG-DNA.pdf>`_.
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the data and input file can be found `here <PDF/CG-DNA.pdf>`_.
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Please cite also the relevant oxDNA/oxRNA publications. These are
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:ref:`(Ouldridge) <Ouldridge0>` and
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:ref:`(Ouldridge-DPhil) <Ouldridge-DPhil0>` for oxDNA,
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@ -103,11 +103,11 @@ Example input and data files for DNA duplexes can be found in examples/PACKAGES/
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A simple python setup tool which creates single straight or helical DNA strands,
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DNA duplexes or arrays of DNA duplexes can be found in examples/PACKAGES/cgdna/util/.
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Please cite :ref:`(Henrich) <Henrich1>` in any publication that uses
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this implementation. The article contains general information
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Please cite :ref:`(Henrich) <Henrich0>` in any publication that uses
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this implementation. An updated documentation that contains general information
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on the model, its implementation and performance as well as the structure of
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the data and input file. The preprint version of the article can be found
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`here <PDF/CG-DNA.pdf>`_.
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the data and input file can be found `here <PDF/CG-DNA.pdf>`_.
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Please cite also the relevant oxDNA publications
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:ref:`(Ouldridge) <Ouldridge1>`,
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:ref:`(Ouldridge-DPhil) <Ouldridge-DPhil1>`
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@ -112,11 +112,11 @@ Example input and data files for DNA duplexes can be found in examples/PACKAGES/
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A simple python setup tool which creates single straight or helical DNA strands,
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DNA duplexes or arrays of DNA duplexes can be found in examples/PACKAGES/cgdna/util/.
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Please cite :ref:`(Henrich) <Henrich2>` in any publication that uses
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this implementation. The article contains general information
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Please cite :ref:`(Henrich) <Henrich0>` in any publication that uses
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this implementation. An updated documentation that contains general information
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on the model, its implementation and performance as well as the structure of
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the data and input file. The preprint version of the article can be found
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`here <PDF/CG-DNA.pdf>`_.
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the data and input file can be found `here <PDF/CG-DNA.pdf>`_.
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Please cite also the relevant oxDNA2 publications
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:ref:`(Snodin) <Snodin2>` and :ref:`(Sulc) <Sulc2>`.
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