fix remaining doc build issues

doc/src/Commands_all.rst

@@ -67,7 +67,7 @@ An alphabetic list of all general LAMMPS commands.
    * :doc:`lattice <lattice>`
    * :doc:`log <log>`
    * :doc:`mass <mass>`
-   * :doc:`mdi/engine <mdi_engine>`
+   * :doc:`mdi <mdi>`
    * :doc:`minimize <minimize>`
    * :doc:`min_modify <min_modify>`
    * :doc:`min_style <min_style>`

doc/src/Packages_details.rst

@@ -1404,7 +1404,8 @@ workflows via the `MolSSI Driver Interface
 
 **Install:**
 
-This package has :ref:`specific installation instructions <message>` on the :doc:`Build extras <Build_extras>` page.
+This package has :ref:`specific installation instructions <mdi>` on
+the :doc:`Build extras <Build_extras>` page.
 
 **Supporting info:**
 

doc/src/commands_list.rst

@@ -59,7 +59,7 @@ Commands
    lattice
    log
    mass
-   mdi_engine
+   mdi
    min_modify
    min_spin
    min_style

doc/src/package.rst

@@ -485,7 +485,7 @@ CPUs a value of *on* is the default since it can often be faster, just
 as it is for non-accelerated pair styles
 
 The *binsize* keyword sets the size of bins used to bin atoms during
- neighbor list builds. The same value can be set by the
+neighbor list builds. The same value can be set by the
 :doc:`neigh_modify binsize <neigh_modify>` command. Making it an option
 in the package kokkos command allows it to be set from the command line.
 The default value for CPUs is 0.0, which means the LAMMPS default will be