update tests for echoing the title line of molecule files
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@ -220,7 +220,7 @@ TEST_F(MoleculeFileTest, minimal)
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BEGIN_CAPTURE_OUTPUT();
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run_mol_cmd(test_name, "", "Comment\n1 atoms\n\n Coords\n\n 1 0.0 0.0 0.0\n");
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auto output = END_CAPTURE_OUTPUT();
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ASSERT_THAT(output, ContainsRegex(".*Read molecule template.*\n.*1 molecules.*\n"
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ASSERT_THAT(output, ContainsRegex(".*Read molecule template.*\n.*Comment.*\n.*1 molecules.*\n"
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".*0 fragments.*\n.*1 atoms.*\n.*0 bonds.*"));
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}
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@ -232,7 +232,7 @@ TEST_F(MoleculeFileTest, notype)
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command("create_box 1 box");
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run_mol_cmd(test_name, "", "Comment\n1 atoms\n\n Coords\n\n 1 0.0 0.0 0.0\n");
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auto output = END_CAPTURE_OUTPUT();
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ASSERT_THAT(output, ContainsRegex(".*Read molecule template.*\n.*1 molecules.*\n"
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ASSERT_THAT(output, ContainsRegex(".*Read molecule template.*\n.*Comment.*\n.*1 molecules.*\n"
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".*0 fragments.*\n.*1 atoms.*\n.*0 bonds.*"));
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TEST_FAILURE(".*ERROR: Create_atoms molecule must have atom types.*",
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command("create_atoms 0 single 0.0 0.0 0.0 mol notype 542465"););
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@ -261,7 +261,7 @@ TEST_F(MoleculeFileTest, twomols)
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" Coords\n\n 1 0.0 0.0 0.0\n 2 0.0 0.0 1.0\n"
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" Molecules\n\n 1 1\n 2 2\n\n Types\n\n 1 1\n 2 2\n\n");
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auto output = END_CAPTURE_OUTPUT();
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ASSERT_THAT(output, ContainsRegex(".*Read molecule template.*\n.*2 molecules.*\n"
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ASSERT_THAT(output, ContainsRegex(".*Read molecule template.*\n.*Comment.*\n.*2 molecules.*\n"
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".*0 fragments.*\n.*2 atoms with max type 2.*\n.*0 bonds.*"));
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ASSERT_EQ(lmp->atom->nmolecule, 1);
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auto mols = lmp->atom->get_molecule_by_id(test_name);
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@ -275,7 +275,7 @@ TEST_F(MoleculeFileTest, twofiles)
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auto output = END_CAPTURE_OUTPUT();
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ASSERT_THAT(
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output,
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ContainsRegex(".*Read molecule template twomols:.*\n.*1 molecules.*\n"
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ContainsRegex(".*Read molecule template twomols:.*\n.*Water.*\n.*1 molecules.*\n"
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".*0 fragments.*\n.*3 atoms with max type 2.*\n.*2 bonds with max type 1.*\n"
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".*1 angles with max type 1.*\n.*0 dihedrals.*\n.*0 impropers.*\n"
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".*Read molecule template twomols:.*\n.*1 molecules.*\n"
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@ -308,7 +308,7 @@ TEST_F(MoleculeFileTest, labelmap)
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auto output = END_CAPTURE_OUTPUT();
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ASSERT_THAT(
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output,
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ContainsRegex(".*Read molecule template h2olabel:.*\n.*1 molecules.*\n"
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ContainsRegex(".*Read molecule template h2olabel:.*\n.*Water.*\n.*1 molecules.*\n"
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".*0 fragments.*\n.*3 atoms with max type 2.*\n.*2 bonds with max type 1.*\n"
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".*1 angles with max type 1.*\n.*0 dihedrals.*\n.*0 impropers.*"));
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BEGIN_CAPTURE_OUTPUT();
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@ -316,7 +316,7 @@ TEST_F(MoleculeFileTest, labelmap)
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output = END_CAPTURE_OUTPUT();
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ASSERT_THAT(
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output,
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ContainsRegex(".*Read molecule template co2label:.*\n.*1 molecules.*\n"
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ContainsRegex(".*Read molecule template co2label:.*\n.*CO2.*\n.*1 molecules.*\n"
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".*0 fragments.*\n.*3 atoms with max type 4.*\n.*2 bonds with max type 2.*\n"
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".*1 angles with max type 2.*\n.*0 dihedrals.*"));
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BEGIN_CAPTURE_OUTPUT();
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@ -330,12 +330,12 @@ TEST_F(MoleculeFileTest, labelmap)
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auto second = output.substr(mark);
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ASSERT_THAT(
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first,
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ContainsRegex(".*Read molecule template h2onum:.*\n.*1 molecules.*\n"
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ContainsRegex(".*Read molecule template h2onum:.*\n.*Water.*\n.*1 molecules.*\n"
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".*0 fragments.*\n.*3 atoms with max type 2.*\n.*2 bonds with max type 1.*\n"
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".*1 angles with max type 1.*\n.*0 dihedrals.*\n.*0 impropers.*\n"));
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ASSERT_THAT(
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second,
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ContainsRegex(".*Read molecule template co2num:.*\n.*1 molecules.*\n"
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ContainsRegex(".*Read molecule template co2num:.*\n.*CO2.*\n.*1 molecules.*\n"
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".*0 fragments.*\n.*3 atoms with max type 4.*\n.*2 bonds with max type 2.*\n"
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".*1 angles with max type 2.*\n.*0 dihedrals.*"));
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ASSERT_EQ(lmp->atom->nmolecule, 4);
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@ -381,7 +381,7 @@ TEST_F(MoleculeFileTest, bonds)
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" 1 1 1 2\n"
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" 2 2 1 3\n\n");
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auto output = END_CAPTURE_OUTPUT();
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ASSERT_THAT(output, ContainsRegex(".*Read molecule template.*\n.*1 molecules.*\n"
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ASSERT_THAT(output, ContainsRegex(".*Read molecule template.*\n.*Comment.*\n.*1 molecules.*\n"
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".*0 fragments.*\n.*4 atoms.*type.*2.*\n"
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".*2 bonds.*type.*2.*\n.*0 angles.*"));
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@ -420,7 +420,7 @@ TEST_F(MoleculeFileTest, dipoles)
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"Types\n\n1 1\n2 2\n\n"
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"Dipoles\n\n1 1.0 0.0 0.0\n2 1.0 1.0 0.0\n\n");
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auto output = END_CAPTURE_OUTPUT();
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ASSERT_THAT(output, ContainsRegex(".*Read molecule template.*\n.*1 molecules.*\n"
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ASSERT_THAT(output, ContainsRegex(".*Read molecule template.*\n.*Dumbbell.*\n.*1 molecules.*\n"
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".*0 fragments.*\n.*2 atoms.*type.*2.*\n"));
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BEGIN_CAPTURE_OUTPUT();
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